A enum value | SBMStructuralModelNodeResidue | |
AcidicPolar enum value | SBMStructuralModelNodeResidue | |
addChild(SBNode *node, SBNode *nextNode=nullptr) override | SBMStructuralModelNodeResidue | virtual |
SBMStructuralModelNode::addChild(SBDDataGraphNode *node, SBDDataGraphNode *nextNode=nullptr) | SBDDataGraphNode | virtual |
addHydrogensByResidueType() | SBMStructuralModelNodeResidue | |
addMaterial(SBDDataGraphNodeMaterial *material) | SBDDataGraphNode | |
ALA enum value | SBMStructuralModelNodeResidue | |
Alpha enum value | SBMStructuralModelNodeResidue | |
Animation enum value | SBDDataGraphNode | |
ARG enum value | SBMStructuralModelNodeResidue | |
ArticulatedBody enum value | SBDDataGraphNode | |
ArticulatedBodySystem enum value | SBDDataGraphNode | |
ASN enum value | SBMStructuralModelNodeResidue | |
ASP enum value | SBMStructuralModelNodeResidue | |
Asset enum value | SBDDataGraphNode | |
ASX enum value | SBMStructuralModelNodeResidue | |
Atom enum value | SBDDataGraphNode | |
Backbone enum value | SBDDataGraphNode | |
baseSignalIsConnectedToSlot(SBCReferenceTarget *referenceTarget, void(SBCReferenceTarget::*functionPointer)(SBBaseEvent *)) const | SBDDataGraphNode | |
BasicPolar enum value | SBMStructuralModelNodeResidue | |
Beta enum value | SBMStructuralModelNodeResidue | |
Bond enum value | SBDDataGraphNode | |
C enum value | SBMStructuralModelNodeResidue | |
Camera enum value | SBDDataGraphNode | |
canAddChild(const SBNode *node, const SBNode *nextNode=nullptr) const override | SBMStructuralModelNodeResidue | virtual |
SBMStructuralModelNode::canAddChild(const SBDDataGraphNode *node, const SBDDataGraphNode *nextNode=nullptr) const | SBDDataGraphNode | virtual |
canAddChildType(SBNode::Type nodeType) const override | SBMStructuralModelNodeResidue | virtual |
canAddMaterial(SBDDataGraphNode::Type nodeType) | SBDDataGraphNode | static |
canAddMaterial() const | SBDDataGraphNode | |
canHaveDescendantType(SBNode::Type nodeType) const override | SBMStructuralModelNodeResidue | virtual |
Chain enum value | SBDDataGraphNode | |
clearComment() | SBMStructuralModelNodeGroup | |
clearStatusBit() | SBMStructuralModelNodeGroup | |
clearStructuralID() | SBMStructuralModelNodeGroup | |
clone() override | SBMStructuralModelNodeResidue | virtual |
SBDDataGraphNode::clone(const SBNodeIndexer &sourceNodeIndexer, SBNodeIndexer &destinationNodeIndexer) | SBDDataGraphNode | static |
computeAminoAcidChi1Angle() | SBMStructuralModelNodeResidue | |
computeAminoAcidChi2Angle() | SBMStructuralModelNodeResidue | |
computeAminoAcidChi3Angle() | SBMStructuralModelNodeResidue | |
computeAminoAcidChi4Angle() | SBMStructuralModelNodeResidue | |
computeAminoAcidChi5Angle() | SBMStructuralModelNodeResidue | |
computeAminoAcidPhiAngle() | SBMStructuralModelNodeResidue | |
computeAminoAcidPsiAngle() | SBMStructuralModelNodeResidue | |
computeNucleicAcidAlphaAngle() | SBMStructuralModelNodeResidue | |
computeNucleicAcidBetaAngle() | SBMStructuralModelNodeResidue | |
computeNucleicAcidChiAngle() | SBMStructuralModelNodeResidue | |
computeNucleicAcidDeltaAngle() | SBMStructuralModelNodeResidue | |
computeNucleicAcidEpsilonAngle() | SBMStructuralModelNodeResidue | |
computeNucleicAcidGammaAngle() | SBMStructuralModelNodeResidue | |
computeNucleicAcidZetaAngle() | SBMStructuralModelNodeResidue | |
Conformation enum value | SBDDataGraphNode | |
connectBaseSignalToSlot(SBCReferenceTarget *referenceTarget, void(SBCReferenceTarget::*functionPointer)(SBBaseEvent *), SBCReferenceTarget *nextReferenceTarget=0, void(SBCReferenceTarget::*nextFunctionPointer)(SBBaseEvent *)=0) | SBDDataGraphNode | |
connectStructuralSignalToSlot(SBCReferenceTarget *referenceTarget, void(SBCReferenceTarget::*functionPointer)(SBStructuralEvent *), SBStructuralEvent::Type eventType=SBStructuralEvent::Type::Any, SBCReferenceTarget *nextReferenceTarget=0, void(SBCReferenceTarget::*nextFunctionPointer)(SBStructuralEvent *)=0) (defined in SBMStructuralModelNode) | SBMStructuralModelNode | |
Controller enum value | SBDDataGraphNode | |
ControllerNode enum value | SBDDataGraphNode | |
countNodes(SBDDataGraphNode::Type nodeType, bool selectedNodesOnly=false, const SBNodePredicate &visitPredicate=SBDDataGraphNode::All(), bool includeDependencies=false) const | SBDDataGraphNode | |
countNodes(const SBNodePredicate &selectionPredicate=SBDDataGraphNode::All(), const SBNodePredicate &visitPredicate=SBDDataGraphNode::All(), bool includeDependencies=false) const | SBDDataGraphNode | |
create() | SBDDataGraphNode | |
createCovalentBondsByResidueType() | SBMStructuralModelNodeResidue | |
CYS enum value | SBMStructuralModelNodeResidue | |
DA enum value | SBMStructuralModelNodeResidue | |
DataGraphNodeGroup enum value | SBDDataGraphNode | |
dataPointer (defined in SBCReferenceTarget) | SBCReferenceTarget | protected |
DC enum value | SBMStructuralModelNodeResidue | |
descendsFrom(const SBDDataGraphNode *node) const | SBDDataGraphNode | |
descendsFrom(const SBNodeIndexer &nodeIndexer) const | SBDDataGraphNode | |
descendsFrom(SBPointerIndexer< SBDDataGraphNode > *nodePointerIndexer) const | SBDDataGraphNode | |
DG enum value | SBMStructuralModelNodeResidue | |
DI enum value | SBMStructuralModelNodeResidue | |
disconnectBaseSignalFromSlot(SBCReferenceTarget *referenceTarget, void(SBCReferenceTarget::*functionPointer)(SBBaseEvent *)) | SBDDataGraphNode | |
disconnectStructuralSignalFromSlot(SBCReferenceTarget *referenceTarget, void(SBCReferenceTarget::*functionPointer)(SBStructuralEvent *), SBStructuralEvent::Type eventType=SBStructuralEvent::Type::Any) (defined in SBMStructuralModelNode) | SBMStructuralModelNode | |
display(RenderingPass renderingPass) | SBDDataGraphNode | virtual |
display() | SBDDataGraphNode | virtual |
displayForSelection() | SBDDataGraphNode | virtual |
displayForShadow() | SBDDataGraphNode | virtual |
Document enum value | SBDDataGraphNode | |
DocumentManager enum value | SBDDataGraphNode | |
DT enum value | SBMStructuralModelNodeResidue | |
DynamicalGroup enum value | SBDDataGraphNode | |
DynamicalModel enum value | SBDDataGraphNode | |
DynamicalModelArticulatedBodySystem enum value | SBDDataGraphNode | |
DynamicalModelNode enum value | SBDDataGraphNode | |
DynamicalModelNodeArticulatedBody enum value | SBDDataGraphNode | |
DynamicalModelNodeGroup enum value | SBDDataGraphNode | |
DynamicalModelNodeParticle enum value | SBDDataGraphNode | |
DynamicalModelNodeRigidBody enum value | SBDDataGraphNode | |
DynamicalModelNodeRoot enum value | SBDDataGraphNode | |
DynamicalModelParticleSystem enum value | SBDDataGraphNode | |
DynamicalModelRigidBodySystem enum value | SBDDataGraphNode | |
DynamicalNode enum value | SBDDataGraphNode | |
DynamicalRoot enum value | SBDDataGraphNode | |
erase() | SBDDataGraphNode | |
File enum value | SBDDataGraphNode | |
Folder enum value | SBDDataGraphNode | |
forEachNodeDepthFirst(void(*action)(SBDDataGraphNode *node)) override | SBMStructuralModelNodeGroup | virtual |
forEachNodeDepthFirst(SBCClass *object, void(SBCClass::*action)(SBDDataGraphNode *node)) override | SBMStructuralModelNodeGroup | virtual |
forEachNodeInSelection(SBNodeIndexer &nodeIndexer, void(*action)(SBDDataGraphNode *node)) | SBDDataGraphNode | static |
forEachNodeInSelection(SBNodeIndexer &nodeIndexer, SBCClass *object, void(SBCClass::*action)(SBDDataGraphNode *node)) | SBDDataGraphNode | static |
forEachStructuralNodeBreadthFirst(void(*action)(SBMStructuralModelNode *node)) (defined in SBMStructuralModelNode) | SBMStructuralModelNode | |
forEachStructuralNodeBreadthFirst(SBCClass *object, void(SBCClass::*action)(SBMStructuralModelNode *node)) (defined in SBMStructuralModelNode) | SBMStructuralModelNode | |
forEachStructuralNodeDepthFirst(void(*action)(SBMStructuralModelNode *node)) (defined in SBMStructuralModelNode) | SBMStructuralModelNode | |
forEachStructuralNodeDepthFirst(SBCClass *object, void(SBCClass::*action)(SBMStructuralModelNode *node)) (defined in SBMStructuralModelNode) | SBMStructuralModelNode | |
forEachStructuralNodeInSelection(std::vector< SBMStructuralModelNode * > &selection, void(*action)(SBMStructuralModelNode *node)) (defined in SBMStructuralModelNode) | SBMStructuralModelNode | static |
forEachStructuralNodeInSelection(std::vector< SBMStructuralModelNode * > &selection, SBCClass *object, void(SBCClass::*action)(SBMStructuralModelNode *node)) (defined in SBMStructuralModelNode) | SBMStructuralModelNode | static |
G enum value | SBMStructuralModelNodeResidue | |
getAllStructuralNodesBreadthFirstBottomUp(std::vector< SBMStructuralModelNode * > &nodeIndexer) (defined in SBMStructuralModelNode) | SBMStructuralModelNode | |
getAllStructuralNodesBreadthFirstTopDown(std::vector< SBMStructuralModelNode * > &nodeIndexer) (defined in SBMStructuralModelNode) | SBMStructuralModelNode | |
getAllStructuralNodesDepthFirst(std::vector< SBMStructuralModelNode * > &nodeIndexer) (defined in SBMStructuralModelNode) | SBMStructuralModelNode | |
getAminoAcidOneLetterCode() const | SBMStructuralModelNodeResidue | |
getAminoAcidOneLetterCode(const ResidueType residueType) | SBMStructuralModelNodeResidue | static |
getBackbone() const | SBMStructuralModelNodeResidue | |
getChildren() const override | SBMStructuralModelNodeGroup | virtual |
getComment() const | SBMStructuralModelNodeGroup | |
getDefaultOpacity() const | SBDDataGraphNode | virtual |
getDefaultTransparency() const | SBDDataGraphNode | virtual |
getDissociationConstant1() const | SBMStructuralModelNodeResidue | |
getDissociationConstant1(const ResidueType residueType) | SBMStructuralModelNodeResidue | static |
getDissociationConstant2() const | SBMStructuralModelNodeResidue | |
getDissociationConstant2(const ResidueType residueType) | SBMStructuralModelNodeResidue | static |
getDocument() const | SBDDataGraphNode | |
getFlags() const | SBDDataGraphNode | virtual |
getHierarchyString(const std::string &separator=" / ", bool includeNodeType=false) const | SBDDataGraphNode | virtual |
getHighlightingFlag() const | SBDDataGraphNode | |
getHydrophobicity() const | SBMStructuralModelNodeResidue | |
getHydrophobicity(const HydrophobicityScale hydrophobicityScale) const | SBMStructuralModelNodeResidue | |
getHydrophobicity(const ResidueType residueType, const HydrophobicityScale hydrophobicityScale) | SBMStructuralModelNodeResidue | static |
getHydrophobicityScale() const | SBMStructuralModelNodeResidue | |
getHydrophobicityScaleCount() const | SBMStructuralModelNodeResidue | |
getHydrophobicityScaleCurrentIndex() const | SBMStructuralModelNodeResidue | |
getHydrophobicityScaleItemText(const int index) const | SBMStructuralModelNodeResidue | |
getHydrophobicityScaleString() const | SBMStructuralModelNodeResidue | |
getHydrophobicityScaleString(const HydrophobicityScale hydrophobicityScale) | SBMStructuralModelNodeResidue | static |
getInheritedFlags() const | SBDDataGraphNode | virtual |
getInheritedOpacity() const | SBDDataGraphNode | |
getInheritedTransparency() const | SBDDataGraphNode | |
getInternalStructuralNodesBreadthFirstBottomUp(std::vector< SBMStructuralModelNode * > &nodeIndexer) (defined in SBMStructuralModelNode) | SBMStructuralModelNode | |
getInternalStructuralNodesBreadthFirstTopDown(std::vector< SBMStructuralModelNode * > &nodeIndexer) (defined in SBMStructuralModelNode) | SBMStructuralModelNode | |
getInternalStructuralNodesDepthFirst(std::vector< SBMStructuralModelNode * > &nodeIndexer) (defined in SBMStructuralModelNode) | SBMStructuralModelNode | |
getIsoelectricPointPH() const | SBMStructuralModelNodeResidue | |
getIsoelectricPointPH(const ResidueType residueType) | SBMStructuralModelNodeResidue | static |
getLeafStructuralNodesBreadthFirstBottomUp(std::vector< SBMStructuralModelNode * > &nodeIndexer) (defined in SBMStructuralModelNode) | SBMStructuralModelNode | |
getLeafStructuralNodesBreadthFirstTopDown(std::vector< SBMStructuralModelNode * > &nodeIndexer) (defined in SBMStructuralModelNode) | SBMStructuralModelNode | |
getLeafStructuralNodesDepthFirst(std::vector< SBMStructuralModelNode * > &nodeIndexer) (defined in SBMStructuralModelNode) | SBMStructuralModelNode | |
getLockedFlag() const override | SBMStructuralModelNode | virtual |
getMaterial() const | SBDDataGraphNode | |
getMaterialOwner() const | SBDDataGraphNode | |
getMaximumOpacity() const | SBDDataGraphNode | virtual |
getMaximumTransparency() const override | SBMStructuralModelNode | virtual |
getMemoryFootprint() const (defined in SBCReferenceTarget) | SBCReferenceTarget | |
getMinimumOpacity() const override | SBMStructuralModelNode | virtual |
getMinimumTransparency() const | SBDDataGraphNode | virtual |
getModel() const (defined in SBMStructuralModelNode) | SBMStructuralModelNode | |
getMolecularWeight() override | SBMStructuralModelNodeGroup | virtual |
getName() const | SBDDataGraphNode | virtual |
getNextAminoAcid() const | SBMStructuralModelNodeResidue | |
getNextNode() const | SBDDataGraphNode | |
getNextNode(SBDDataGraphNode::Type nodeType) const | SBDDataGraphNode | |
getNextNucleicAcid() const | SBMStructuralModelNodeResidue | |
getNextResidue() const | SBMStructuralModelNodeResidue | |
getNextStructuralNode() const (defined in SBMStructuralModelNode) | SBMStructuralModelNode | |
getNode(unsigned int nodeIndex) | SBDDataGraphNode | static |
getNodeIndex() const | SBDDataGraphNode | |
getNodes(SBNodeIndexer &nodeIndexer, SBNode::Type nodeType, bool selectedNodesOnly=false, const SBNodePredicate &visitPredicate=SBDDataGraphNode::All(), bool includeDependencies=false) const override | SBMStructuralModelNodeGroup | virtual |
getNodes(SBNodeIndexer &nodeIndexer, const SBNodePredicate &selectionPredicate=SBDDataGraphNode::All(), const SBNodePredicate &visitPredicate=SBDDataGraphNode::All(), bool includeDependencies=false) const override | SBMStructuralModelNodeGroup | virtual |
getNumberOfAtoms() override | SBMStructuralModelNodeGroup | virtual |
getNumberOfCarbons() override | SBMStructuralModelNodeGroup | virtual |
getNumberOfChains() override | SBMStructuralModelNodeGroup | virtual |
getNumberOfCoarseGrainedAtoms() override | SBMStructuralModelNodeGroup | virtual |
getNumberOfHydrogens() override | SBMStructuralModelNodeGroup | virtual |
getNumberOfMolecules() override | SBMStructuralModelNodeGroup | virtual |
getNumberOfNitrogens() override | SBMStructuralModelNodeGroup | virtual |
getNumberOfOtherAtoms() override | SBMStructuralModelNodeGroup | virtual |
getNumberOfOxygens() override | SBMStructuralModelNodeGroup | virtual |
getNumberOfResidues() override | SBMStructuralModelNodeGroup | virtual |
getNumberOfSegments() override | SBMStructuralModelNodeGroup | virtual |
getNumberOfStructuralGroups() override | SBMStructuralModelNodeGroup | virtual |
getNumberOfStructuralModels() | SBDDataGraphNode | virtual |
getNumberOfSulfurs() override | SBMStructuralModelNodeGroup | virtual |
getOpacity() const override | SBMStructuralModelNode | virtual |
getOpacitySingleStep() const | SBDDataGraphNode | virtual |
getOpacitySuffix() const | SBDDataGraphNode | virtual |
getParent() const | SBDDataGraphNode | |
getPreviousAminoAcid() const | SBMStructuralModelNodeResidue | |
getPreviousNode() const | SBDDataGraphNode | |
getPreviousNode(SBDDataGraphNode::Type nodeType) const | SBDDataGraphNode | |
getPreviousNucleicAcid() const | SBMStructuralModelNodeResidue | |
getPreviousResidue() const | SBMStructuralModelNodeResidue | |
getPreviousStructuralNode() const (defined in SBMStructuralModelNode) | SBMStructuralModelNode | |
getResidueType() const | SBMStructuralModelNodeResidue | |
getResidueTypeFromAminoAcidOneLetterCode(const std::string &s) | SBMStructuralModelNodeResidue | static |
getResidueTypeFromString(const std::string &s) | SBMStructuralModelNodeResidue | static |
getResidueTypeFullName() const | SBMStructuralModelNodeResidue | |
getResidueTypeFullName(ResidueType residueType) | SBMStructuralModelNodeResidue | static |
getResidueTypeString() const | SBMStructuralModelNodeResidue | |
getResidueTypeString(ResidueType residueType) | SBMStructuralModelNodeResidue | static |
getRoot() const | SBDDataGraphNode | |
getSecondaryStructureType() const | SBMStructuralModelNodeResidue | |
getSecondaryStructureTypeString() const | SBMStructuralModelNodeResidue | |
getSecondaryStructureTypeString(SecondaryStructureType secondaryStructureType) | SBMStructuralModelNodeResidue | static |
getSelected() const | SBDDataGraphNode | |
getSelectionFlag() const | SBDDataGraphNode | |
getSideChain() const | SBMStructuralModelNodeResidue | |
getSideChainCharge() const | SBMStructuralModelNodeResidue | |
getSideChainCharge(const ResidueType residueType) | SBMStructuralModelNodeResidue | static |
getSideChainChargeString() const | SBMStructuralModelNodeResidue | |
getSideChainChargeString(const SideChainCharge sideChainCharge) | SBMStructuralModelNodeResidue | static |
getSideChainPolarity() const | SBMStructuralModelNodeResidue | |
getSideChainPolarity(const ResidueType residueType) | SBMStructuralModelNodeResidue | static |
getSideChainPolarityString() const | SBMStructuralModelNodeResidue | |
getSideChainPolarityString(const SideChainPolarity sideChainPolarity) | SBMStructuralModelNodeResidue | static |
getStatusBit() const | SBMStructuralModelNodeGroup | |
getStructuralID() const | SBMStructuralModelNodeGroup | |
getStructuralNodesBreadthFirst(std::vector< SBMStructuralModelNode * > &nodeVectorTopDown, std::vector< SBMStructuralModelNode * > &nodeVectorBottomUp, bool(*selectionRule)(SBMStructuralModelNode *)) (defined in SBMStructuralModelNode) | SBMStructuralModelNode | |
getStructuralNodesBreadthFirstBottomUp(std::vector< SBMStructuralModelNode * > &nodeIndexer, bool(*selectionRule)(SBMStructuralModelNode *)) (defined in SBMStructuralModelNode) | SBMStructuralModelNode | |
getStructuralNodesBreadthFirstTopDown(std::vector< SBMStructuralModelNode * > &nodeIndexer, bool(*selectionRule)(SBMStructuralModelNode *)) (defined in SBMStructuralModelNode) | SBMStructuralModelNode | |
getStructuralNodesDepthFirst(std::vector< SBMStructuralModelNode * > &nodeIndexer, bool(*selectionRule)(SBMStructuralModelNode *)) (defined in SBMStructuralModelNode) | SBMStructuralModelNode | |
getStructuralSignalFlag() const | SBMStructuralModelNode | |
getSumOfFormalCharges() override | SBMStructuralModelNodeGroup | virtual |
getSumOfPartialCharges() override | SBMStructuralModelNodeGroup | virtual |
getThisNode() const | SBDDataGraphNode | |
getTransparency() const override | SBMStructuralModelNode | virtual |
getTransparencySingleStep() const | SBDDataGraphNode | virtual |
getTransparencySuffix() const | SBDDataGraphNode | virtual |
getType() const override | SBMStructuralModelNodeResidue | virtual |
getTypeString(bool humanReadable=false) const | SBDDataGraphNode | |
getTypeString(Type type, bool humanReadable=false) | SBDDataGraphNode | static |
getVisibilityFlag() const | SBDDataGraphNode | |
getVisible() const | SBDDataGraphNode | |
GLN enum value | SBMStructuralModelNodeResidue | |
GLU enum value | SBMStructuralModelNodeResidue | |
GLX enum value | SBMStructuralModelNodeResidue | |
GLY enum value | SBMStructuralModelNodeResidue | |
hasAminoAcidChi1Angle() const | SBMStructuralModelNodeResidue | |
hasAminoAcidChi1Angle(const ResidueType residueType) | SBMStructuralModelNodeResidue | static |
hasAminoAcidChi2Angle() const | SBMStructuralModelNodeResidue | |
hasAminoAcidChi2Angle(const ResidueType residueType) | SBMStructuralModelNodeResidue | static |
hasAminoAcidChi3Angle() const | SBMStructuralModelNodeResidue | |
hasAminoAcidChi3Angle(const ResidueType residueType) | SBMStructuralModelNodeResidue | static |
hasAminoAcidChi4Angle() const | SBMStructuralModelNodeResidue | |
hasAminoAcidChi4Angle(const ResidueType residueType) | SBMStructuralModelNodeResidue | static |
hasAminoAcidChi5Angle() const | SBMStructuralModelNodeResidue | |
hasAminoAcidChi5Angle(const ResidueType residueType) | SBMStructuralModelNodeResidue | static |
hasComment() const | SBMStructuralModelNodeGroup | |
hasCompleteAminoAcidBackbone() const | SBMStructuralModelNodeResidue | |
hasDissociationConstant() const | SBMStructuralModelNodeResidue | |
hasDissociationConstant(const ResidueType residueType) | SBMStructuralModelNodeResidue | static |
hasHydrophobicity() const | SBMStructuralModelNodeResidue | |
hasHydrophobicity(const ResidueType residueType) | SBMStructuralModelNodeResidue | static |
hasMaterial() const | SBDDataGraphNode | |
hasNode(SBNode::Type nodeType, bool selectedNodesOnly=false, const SBNodePredicate &visitPredicate=SBDDataGraphNode::All(), bool includeDependencies=false) const override | SBMStructuralModelNodeGroup | virtual |
hasNode(const SBNodePredicate &selectionPredicate=SBDDataGraphNode::All(), const SBNodePredicate &visitPredicate=SBDDataGraphNode::All(), bool includeDependencies=false) const override | SBMStructuralModelNodeGroup | virtual |
hasOneOf(const SBNodeIndexer &nodeIndexer) const | SBDDataGraphNode | |
hasOpacityRange() const | SBDDataGraphNode | virtual |
hasSideChainCharge() const | SBMStructuralModelNodeResidue | |
hasSideChainCharge(const ResidueType residueType) | SBMStructuralModelNodeResidue | static |
hasSideChainPolarity() const | SBMStructuralModelNodeResidue | |
hasSideChainPolarity(const ResidueType residueType) | SBMStructuralModelNodeResidue | static |
hasStandardResidueName() const | SBMStructuralModelNodeResidue | |
hasStatusBit() const | SBMStructuralModelNodeGroup | |
hasStructuralID() const | SBMStructuralModelNodeGroup | |
hasTransparencyRange() const | SBDDataGraphNode | virtual |
HIS enum value | SBMStructuralModelNodeResidue | |
HydrogenBond enum value | SBDDataGraphNode | |
HydrogenBondGroup enum value | SBDDataGraphNode | |
HydrophobicityScale enum name | SBMStructuralModelNodeResidue | |
I enum value | SBMStructuralModelNodeResidue | |
ILE enum value | SBMStructuralModelNodeResidue | |
InteractionModel enum value | SBDDataGraphNode | |
InteractionModelArticulatedBodySystem enum value | SBDDataGraphNode | |
InteractionModelParticleSystem enum value | SBDDataGraphNode | |
InteractionModelRigidBodySystem enum value | SBDDataGraphNode | |
isAminoAcid() const | SBMStructuralModelNodeResidue | |
isAminoAcid(ResidueType residueType) | SBMStructuralModelNodeResidue | static |
isAtom() const | SBDDataGraphNode | |
isBallAndStick() const | SBDDataGraphNode | |
isBond() const | SBDDataGraphNode | |
isCartoon() const | SBDDataGraphNode | |
isCreated() const | SBDDataGraphNode | |
isDynamicalModel() const | SBDDataGraphNode | |
isErased() const | SBDDataGraphNode | |
isGaussianSurface() const | SBDDataGraphNode | |
isHighlighted() const | SBDDataGraphNode | |
isIn(const SBDDataGraphNode *node) const | SBDDataGraphNode | |
isIn(const SBNodeIndexer &nodeIndexer) const | SBDDataGraphNode | |
isIn(SBPointerIndexer< SBDDataGraphNode > *nodePointerIndexer) const | SBDDataGraphNode | |
isInteractionModel() const | SBDDataGraphNode | |
isLicorice() const | SBDDataGraphNode | |
isLight() const | SBDDataGraphNode | |
isLocked() const override | SBMStructuralModelNode | virtual |
isMesh() const | SBDDataGraphNode | |
isModel() const | SBDDataGraphNode | |
isMonatomicIon() | SBMStructuralModelNodeGroup | |
isNucleicAcid() const | SBMStructuralModelNodeResidue | |
isNucleicAcid(ResidueType residueType) | SBMStructuralModelNodeResidue | static |
isOneOf(const SBNodeIndexer &nodeIndexer) const | SBDDataGraphNode | |
isOneOf(SBPointerIndexer< SBDDataGraphNode > *nodePointerIndexer) const | SBDDataGraphNode | |
isPropertyModel() const | SBDDataGraphNode | |
isRibbon() const | SBDDataGraphNode | |
isSelected() const | SBDDataGraphNode | |
isSerializable() const override | SBMStructuralModelNodeResidue | virtual |
isSimulator() const | SBDDataGraphNode | |
isSolventAccessibleSurface() const | SBDDataGraphNode | |
isSolventExcludedSurface() const | SBDDataGraphNode | |
isStandardAminoAcidName(const std::string &name) | SBMStructuralModelNodeResidue | static |
isStandardNucleicAcidName(const std::string &name) | SBMStructuralModelNodeResidue | static |
isStandardResidueName(const std::string &name) | SBMStructuralModelNodeResidue | static |
isStructuralModel() const | SBDDataGraphNode | |
isStructuralNode() const | SBDDataGraphNode | |
isTerminal() const | SBMStructuralModelNodeResidue | |
isTube() const | SBDDataGraphNode | |
isType(Type type) const | SBDDataGraphNode | |
isVanDerWaals() const | SBDDataGraphNode | |
isVisible() const | SBDDataGraphNode | |
isVisualModel() const | SBDDataGraphNode | |
isWater() | SBMStructuralModelNodeGroup | |
Label enum value | SBDDataGraphNode | |
LEU enum value | SBMStructuralModelNodeResidue | |
Light enum value | SBDDataGraphNode | |
LYS enum value | SBMStructuralModelNodeResidue | |
Mesh enum value | SBDDataGraphNode | |
MET enum value | SBMStructuralModelNodeResidue | |
Molecule enum value | SBDDataGraphNode | |
Negative enum value | SBMStructuralModelNodeResidue | |
Neutral enum value | SBMStructuralModelNodeResidue | |
NodeGroup enum value | SBDDataGraphNode | |
Nonpolar enum value | SBMStructuralModelNodeResidue | |
Note enum value | SBDDataGraphNode | |
onBaseEvent(SBEvent *event) (defined in SBMStructuralModelNodeGroup) | SBMStructuralModelNodeGroup | virtual |
orientAminoAcidSideChain(const SBQuantity::degree &chi1, const SBQuantity::degree &chi2=SBQuantity::degree(0.0), const SBQuantity::degree &chi3=SBQuantity::degree(0.0), const SBQuantity::degree &chi4=SBQuantity::degree(0.0), const SBQuantity::degree &chi5=SBQuantity::degree(0.0)) | SBMStructuralModelNodeResidue | |
ownsMaterial() const | SBDDataGraphNode | |
Particle enum value | SBDDataGraphNode | |
ParticleSystem enum value | SBDDataGraphNode | |
Path enum value | SBDDataGraphNode | |
PHE enum value | SBMStructuralModelNodeResidue | |
Polar enum value | SBMStructuralModelNodeResidue | |
Positive enum value | SBMStructuralModelNodeResidue | |
Presentation enum value | SBDDataGraphNode | |
print(unsigned int offset=0) const override | SBMStructuralModelNodeGroup | virtual |
printReferencesToOwners() const (defined in SBCReferenceTarget) | SBCReferenceTarget | |
PRO enum value | SBMStructuralModelNodeResidue | |
PropertyModel enum value | SBDDataGraphNode | |
PropertyModelFunction enum value | SBDDataGraphNode | |
PYL enum value | SBMStructuralModelNodeResidue | |
removeAllReferenceOwners() (defined in SBCReferenceTarget) | SBCReferenceTarget | protected |
removeChild(SBNode *node) override | SBMStructuralModelNodeResidue | virtual |
SBMStructuralModelNode::removeChild(SBDDataGraphNode *node) | SBDDataGraphNode | virtual |
removeMaterial() | SBDDataGraphNode | |
removeMaterialsFromDescendants() | SBDDataGraphNode | |
RenderingPass enum name | SBDDataGraphNode | |
RenderPreset enum value | SBDDataGraphNode | |
Residue enum value | SBDDataGraphNode | |
ResidueType enum name | SBMStructuralModelNodeResidue | |
RigidBody enum value | SBDDataGraphNode | |
RigidBodySystem enum value | SBDDataGraphNode | |
Root enum value | SBDDataGraphNode | |
SB_DECLARE_DATA(SBMStructuralModelNodeResidue) (defined in SBMStructuralModelNodeResidue) | SBMStructuralModelNodeResidue | |
SB_DECLARE_DATA(SBMStructuralModelNodeGroup) (defined in SBMStructuralModelNodeGroup) | SBMStructuralModelNodeGroup | |
SB_DECLARE_DATA(SBMStructuralModelNode) (defined in SBMStructuralModelNode) | SBMStructuralModelNode | |
SB_DECLARE_DATA(SBMModelNode) (defined in SBMModelNode) | SBMModelNode | |
SB_DECLARE_DATA(SBDDataGraphNode) (defined in SBDDataGraphNode) | SBDDataGraphNode | |
SB_NODE_GETTER_0(, SBMStructuralModelNodeResidue::ResidueType, GetResidueType) (defined in SBMStructuralModelNodeResidue) | SBMStructuralModelNodeResidue | |
SB_NODE_GETTER_0(, std::string, GetResidueTypeString) (defined in SBMStructuralModelNodeResidue) | SBMStructuralModelNodeResidue | |
SB_NODE_GETTER_0(, SBMStructuralModelNodeResidue::SecondaryStructureType, GetSecondaryStructureType) (defined in SBMStructuralModelNodeResidue) | SBMStructuralModelNodeResidue | |
SB_NODE_GETTER_0(, double, GetHydrophobicity) (defined in SBMStructuralModelNodeResidue) | SBMStructuralModelNodeResidue | |
SB_NODE_GETTER_0(, SBMStructuralModelNodeResidue::HydrophobicityScale, GetHydrophobicityScale) (defined in SBMStructuralModelNodeResidue) | SBMStructuralModelNodeResidue | |
SB_NODE_GETTER_0(, SBMStructuralModelNodeResidue::SideChainCharge, GetSideChainCharge) (defined in SBMStructuralModelNodeResidue) | SBMStructuralModelNodeResidue | |
SB_NODE_GETTER_0(, std::string, GetSideChainChargeString) (defined in SBMStructuralModelNodeResidue) | SBMStructuralModelNodeResidue | |
SB_NODE_GETTER_0(, SBMStructuralModelNodeResidue::SideChainPolarity, GetSideChainPolarity) (defined in SBMStructuralModelNodeResidue) | SBMStructuralModelNodeResidue | |
SB_NODE_GETTER_0(, std::string, GetSideChainPolarityString) (defined in SBMStructuralModelNodeResidue) | SBMStructuralModelNodeResidue | |
SB_NODE_GETTER_0(, double, GetDissociationConstant1) (defined in SBMStructuralModelNodeResidue) | SBMStructuralModelNodeResidue | |
SB_NODE_GETTER_0(, double, GetDissociationConstant2) (defined in SBMStructuralModelNodeResidue) | SBMStructuralModelNodeResidue | |
SB_NODE_GETTER_0(, double, GetIsoelectricPointPH) (defined in SBMStructuralModelNodeResidue) | SBMStructuralModelNodeResidue | |
SB_NODE_GETTER_0(, int, GetResidueSequenceNumber) (defined in SBMStructuralModelNodeResidue) | SBMStructuralModelNodeResidue | |
SB_NODE_GETTER_0(, std::string, GetComment) (defined in SBMStructuralModelNodeGroup) | SBMStructuralModelNodeGroup | |
SB_NODE_GETTER_0(, std::string, GetStatusBit) (defined in SBMStructuralModelNodeGroup) | SBMStructuralModelNodeGroup | |
SB_NODE_GETTER_0(, int, GetStructuralID) (defined in SBMStructuralModelNodeGroup) | SBMStructuralModelNodeGroup | |
SB_NODE_PREDICATE_0(, IsAminoAcid) (defined in SBMStructuralModelNodeResidue) | SBMStructuralModelNodeResidue | |
SB_NODE_PREDICATE_0(, IsNucleicAcid) (defined in SBMStructuralModelNodeResidue) | SBMStructuralModelNodeResidue | |
SB_NODE_PREDICATE_0(, IsTerminal) (defined in SBMStructuralModelNodeResidue) | SBMStructuralModelNodeResidue | |
SB_NODE_PREDICATE_0(, HasStandardResidueName) (defined in SBMStructuralModelNodeResidue) | SBMStructuralModelNodeResidue | |
SB_NODE_PREDICATE_0(, HasCompleteAminoAcidBackbone) (defined in SBMStructuralModelNodeResidue) | SBMStructuralModelNodeResidue | |
SB_NODE_PREDICATE_0(, HasHydrophobicity) (defined in SBMStructuralModelNodeResidue) | SBMStructuralModelNodeResidue | |
SB_NODE_PREDICATE_0(, HasSideChainCharge) (defined in SBMStructuralModelNodeResidue) | SBMStructuralModelNodeResidue | |
SB_NODE_PREDICATE_0(, HasSideChainPolarity) (defined in SBMStructuralModelNodeResidue) | SBMStructuralModelNodeResidue | |
SB_NODE_PREDICATE_0(, HasDissociationConstant) (defined in SBMStructuralModelNodeResidue) | SBMStructuralModelNodeResidue | |
SB_NODE_PREDICATE_0(, HasResidueSequenceNumber) (defined in SBMStructuralModelNodeResidue) | SBMStructuralModelNodeResidue | |
SB_NODE_PREDICATE_0(, HasComment) (defined in SBMStructuralModelNodeGroup) | SBMStructuralModelNodeGroup | |
SB_NODE_PREDICATE_0(, HasStatusBit) (defined in SBMStructuralModelNodeGroup) | SBMStructuralModelNodeGroup | |
SB_NODE_PREDICATE_0(, HasStructuralID) (defined in SBMStructuralModelNodeGroup) | SBMStructuralModelNodeGroup | |
SBCReferenceTarget() (defined in SBCReferenceTarget) | SBCReferenceTarget | |
SBCReferenceTarget(SBCReferenceTargetData *dataPointer) (defined in SBCReferenceTarget) | SBCReferenceTarget | protected |
SBDDataGraphNode() | SBDDataGraphNode | protected |
SBDDataGraphNode(SBDDataGraphNodeData *dataPointer) | SBDDataGraphNode | protected |
SBMModelNode() | SBMModelNode | protected |
SBMModelNode(SBMModelNodeData *dataPointer) | SBMModelNode | protected |
SBMStructuralModelNode() | SBMStructuralModelNode | protected |
SBMStructuralModelNode(SBMStructuralModelNodeData *dataPointer) | SBMStructuralModelNode | protected |
SBMStructuralModelNodeGroup() | SBMStructuralModelNodeGroup | |
SBMStructuralModelNodeGroup(const std::string &n) (defined in SBMStructuralModelNodeGroup) | SBMStructuralModelNodeGroup | |
SBMStructuralModelNodeGroup(SBMStructuralModelNodeGroupData *dataPointer) | SBMStructuralModelNodeGroup | protected |
SBMStructuralModelNodeResidue() (defined in SBMStructuralModelNodeResidue) | SBMStructuralModelNodeResidue | |
SBMStructuralModelNodeResidue(const std::string &n) (defined in SBMStructuralModelNodeResidue) | SBMStructuralModelNodeResidue | |
SEC enum value | SBMStructuralModelNodeResidue | |
SecondaryStructureType enum name | SBMStructuralModelNodeResidue | |
Segment enum value | SBDDataGraphNode | |
SER enum value | SBMStructuralModelNodeResidue | |
serialize(SBCSerializer *serializer, const SBNodeIndexer &nodeIndexer, const SBVersionNumber &sdkVersionNumber=SB_SDK_VERSION_NUMBER, const SBVersionNumber &classVersionNumber=SBVersionNumber(1, 0, 0)) const override | SBMStructuralModelNodeResidue | virtual |
setComment(const std::string &comment) | SBMStructuralModelNodeGroup | |
setHighlightingFlag(bool flag) | SBDDataGraphNode | |
setHydrophobicityScale(const HydrophobicityScale hydrophobicityScale) | SBMStructuralModelNodeResidue | |
setHydrophobicityScaleCurrentIndex(const int index) | SBMStructuralModelNodeResidue | |
setLockedFlag(bool flag) | SBDDataGraphNode | virtual |
setName(const std::string &name) override | SBMStructuralModelNodeResidue | virtual |
setOpacity(unsigned int opacity) | SBDDataGraphNode | virtual |
setResidueType(ResidueType residueType) | SBMStructuralModelNodeResidue | |
setResidueType(const std::string &s) | SBMStructuralModelNodeResidue | |
setSecondaryStructureType(SecondaryStructureType type) | SBMStructuralModelNodeResidue | |
setSelectionFlag(bool flag) | SBDDataGraphNode | |
setStatusBit(const std::string &statusBit) | SBMStructuralModelNodeGroup | |
setStructuralID(const int &groupID) | SBMStructuralModelNodeGroup | |
setStructuralSignalFlag(bool structuralSignalFlag) | SBMStructuralModelNode | |
setTransparency(unsigned int transparency) | SBDDataGraphNode | virtual |
setVisibilityFlag(bool flag) | SBDDataGraphNode | |
SideChain enum value | SBDDataGraphNode | |
SideChainCharge enum name | SBMStructuralModelNodeResidue | |
SideChainPolarity enum name | SBMStructuralModelNodeResidue | |
Simulator enum value | SBDDataGraphNode | |
SimulatorArticulatedBodySystem enum value | SBDDataGraphNode | |
SimulatorParticleSystem enum value | SBDDataGraphNode | |
SimulatorRigidBodySystem enum value | SBDDataGraphNode | |
StateUpdater enum value | SBDDataGraphNode | |
StateUpdaterArticulatedBodySystem enum value | SBDDataGraphNode | |
StateUpdaterParticleSystem enum value | SBDDataGraphNode | |
StateUpdaterRigidBodySystem enum value | SBDDataGraphNode | |
StructuralGroup enum value | SBDDataGraphNode | |
StructuralModel enum value | SBDDataGraphNode | |
StructuralModelConformation enum value | SBDDataGraphNode | |
StructuralModelNode enum value | SBDDataGraphNode | |
StructuralModelNodeAtom enum value | SBDDataGraphNode | |
StructuralModelNodeBackbone enum value | SBDDataGraphNode | |
StructuralModelNodeBond enum value | SBDDataGraphNode | |
StructuralModelNodeChain enum value | SBDDataGraphNode | |
StructuralModelNodeGroup enum value | SBDDataGraphNode | |
StructuralModelNodeHydrogenBond enum value | SBDDataGraphNode | |
StructuralModelNodeHydrogenBondGroup enum value | SBDDataGraphNode | |
StructuralModelNodeMolecule enum value | SBDDataGraphNode | |
StructuralModelNodeResidue enum value | SBDDataGraphNode | |
StructuralModelNodeRoot enum value | SBDDataGraphNode | |
StructuralModelNodeSegment enum value | SBDDataGraphNode | |
StructuralModelNodeSideChain enum value | SBDDataGraphNode | |
StructuralModelPath enum value | SBDDataGraphNode | |
structuralSignalIsConnectedToSlot(SBCReferenceTarget *referenceTarget, void(SBCReferenceTarget::*functionPointer)(SBStructuralEvent *), SBStructuralEvent::Type eventType=SBStructuralEvent::Type::Any) const (defined in SBMStructuralModelNode) | SBMStructuralModelNode | |
THR enum value | SBMStructuralModelNodeResidue | |
TRP enum value | SBMStructuralModelNodeResidue | |
Type enum name | SBDDataGraphNode | |
TYR enum value | SBMStructuralModelNodeResidue | |
U enum value | SBMStructuralModelNodeResidue | |
Undefined enum value | SBMStructuralModelNodeResidue | |
UndefinedSideChainCharge enum value | SBMStructuralModelNodeResidue | |
UndefinedSideChainPolarity enum value | SBMStructuralModelNodeResidue | |
unserialize(SBCSerializer *serializer, const SBNodeIndexer &nodeIndexer, const SBVersionNumber &sdkVersionNumber=SB_SDK_VERSION_NUMBER, const SBVersionNumber &classVersionNumber=SBVersionNumber(1, 0, 0)) override | SBMStructuralModelNodeResidue | virtual |
Unstructured enum value | SBMStructuralModelNodeResidue | |
VAL enum value | SBMStructuralModelNodeResidue | |
VisualModel enum value | SBDDataGraphNode | |
VisualModelMesh enum value | SBDDataGraphNode | |
XAA enum value | SBMStructuralModelNodeResidue | |
XLE enum value | SBMStructuralModelNodeResidue | |
~SBCReferenceTarget() (defined in SBCReferenceTarget) | SBCReferenceTarget | virtual |
~SBDDataGraphNode() | SBDDataGraphNode | protectedvirtual |
~SBMModelNode() (defined in SBMModelNode) | SBMModelNode | protectedvirtual |
~SBMStructuralModelNode() (defined in SBMStructuralModelNode) | SBMStructuralModelNode | virtual |
~SBMStructuralModelNodeGroup() (defined in SBMStructuralModelNodeGroup) | SBMStructuralModelNodeGroup | virtual |
~SBMStructuralModelNodeResidue() (defined in SBMStructuralModelNodeResidue) | SBMStructuralModelNodeResidue | virtual |