SBMStructuralModelNodeAtom Member List

This is the complete list of members for SBMStructuralModelNodeAtom, including all inherited members.

addChild(SBDDataGraphNode *node, SBDDataGraphNode *nextNode=0)	SBDDataGraphNode	virtual
addHydrogens()	SBMStructuralModelNodeAtom
addMaterial(SBDDataGraphNodeMaterial *material)	SBDDataGraphNode
ArticulatedBody enum value	SBDDataGraphNode
ArticulatedBodySystem enum value	SBDDataGraphNode
Asset enum value	SBDDataGraphNode
Atom enum value	SBDDataGraphNode
Backbone enum value	SBDDataGraphNode
baseSignalIsConnectedToSlot(SBCReferenceTarget *referenceTarget, void(SBCReferenceTarget::*functionPointer)(SBBaseEvent *)) const	SBDDataGraphNode
Bond enum value	SBDDataGraphNode
Camera enum value	SBDDataGraphNode
canAddChild(SBDDataGraphNode *node, SBDDataGraphNode *nextNode=0) const	SBDDataGraphNode	virtual
canAddChildType(SBDDataGraphNode::Type nodeType) const	SBDDataGraphNode	virtual
Chain enum value	SBDDataGraphNode
clearAltLocation()	SBMStructuralModelNodeAtom
clearAnisotropicTFactors()	SBMStructuralModelNodeAtom
clearAromaticity()	SBMStructuralModelNodeAtom
clearComment()	SBMStructuralModelNodeAtom
clearCustomType()	SBMStructuralModelNodeAtom
clearFormalCharge()	SBMStructuralModelNodeAtom
clearGeometry()	SBMStructuralModelNodeAtom
clearHybridization()	SBMStructuralModelNodeAtom
clearInsertionCode()	SBMStructuralModelNodeAtom
clearName()	SBMStructuralModelNodeAtom
clearOccupancy()	SBMStructuralModelNodeAtom
clearOxidationState()	SBMStructuralModelNodeAtom
clearPartialCharge()	SBMStructuralModelNodeAtom
clearRecordType()	SBMStructuralModelNodeAtom
clearResonance()	SBMStructuralModelNodeAtom
clearSerialNumber()	SBMStructuralModelNodeAtom
clearStatusBit()	SBMStructuralModelNodeAtom
clearSYBYLType()	SBMStructuralModelNodeAtom
clearTemperatureFactor()	SBMStructuralModelNodeAtom
clearWaterFlag()	SBMStructuralModelNodeAtom
clone()	SBMStructuralModelNodeAtom	virtual
SBDDataGraphNode::clone(const SBNodeIndexer &sourceNodeIndexer, SBNodeIndexer &destinationNodeIndexer)	SBDDataGraphNode	static
Conformation enum value	SBDDataGraphNode
connectBaseSignalToSlot(SBCReferenceTarget *referenceTarget, void(SBCReferenceTarget::*functionPointer)(SBBaseEvent *), SBCReferenceTarget *nextReferenceTarget=0, void(SBCReferenceTarget::*nextFunctionPointer)(SBBaseEvent *)=0)	SBDDataGraphNode
Controller enum value	SBDDataGraphNode
ControllerNode enum value	SBDDataGraphNode
countNodes(const SBNodePredicate &selectionPredicate=SBDDataGraphNode::All(), const SBNodePredicate &visitPredicate=SBDDataGraphNode::All(), bool includeDependencies=false)	SBDDataGraphNode
create()	SBDDataGraphNode
DataGraphNodeGroup enum value	SBDDataGraphNode
disconnectBaseSignalFromSlot(SBCReferenceTarget *referenceTarget, void(SBCReferenceTarget::*functionPointer)(SBBaseEvent *))	SBDDataGraphNode
display(RenderingPass renderingPass)	SBDDataGraphNode	virtual
display()	SBDDataGraphNode	virtual
displayForSelection()	SBDDataGraphNode	virtual
displayForShadow()	SBDDataGraphNode	virtual
Document enum value	SBDDataGraphNode
DocumentManager enum value	SBDDataGraphNode
DynamicalGroup enum value	SBDDataGraphNode
DynamicalModel enum value	SBDDataGraphNode
DynamicalModelArticulatedBodySystem enum value	SBDDataGraphNode
DynamicalModelNode enum value	SBDDataGraphNode
DynamicalModelNodeArticulatedBody enum value	SBDDataGraphNode
DynamicalModelNodeGroup enum value	SBDDataGraphNode
DynamicalModelNodeParticle enum value	SBDDataGraphNode
DynamicalModelNodeRigidBody enum value	SBDDataGraphNode
DynamicalModelNodeRoot enum value	SBDDataGraphNode
DynamicalModelParticleSystem enum value	SBDDataGraphNode
DynamicalModelRigidBodySystem enum value	SBDDataGraphNode
DynamicalNode enum value	SBDDataGraphNode
DynamicalParticle enum value	SBDDataGraphNode
DynamicalRoot enum value	SBDDataGraphNode
erase()	SBDDataGraphNode
Folder enum value	SBDDataGraphNode
forEachNodeDepthFirst(void(*action)(SBDDataGraphNode *node))	SBMStructuralModelNode	virtual
forEachNodeDepthFirst(SBCClass *object, void(SBCClass::*action)(SBDDataGraphNode *node))	SBMStructuralModelNode	virtual
forEachNodeInSelection(SBNodeIndexer &nodeIndexer, void(*action)(SBDDataGraphNode *node))	SBDDataGraphNode	static
forEachNodeInSelection(SBNodeIndexer &nodeIndexer, SBCClass *object, void(SBCClass::*action)(SBDDataGraphNode *node))	SBDDataGraphNode	static
Geometry enum name	SBMStructuralModelNodeAtom
getAltLocation() const	SBMStructuralModelNodeAtom
getAnisotropicTFactors() const	SBMStructuralModelNodeAtom
getAromaticity() const	SBMStructuralModelNodeAtom
getAtomicWeight() const	SBMStructuralModelNodeAtom
getBlock() const	SBMStructuralModelNodeAtom
getBondedAtoms(SBNodeIndexer &nodeIndexer, const SBElement::Type element)	SBMStructuralModelNodeAtom
getBondList() const	SBMStructuralModelNodeAtom
getBondTo(SBMStructuralModelNodeAtom *atom) const	SBMStructuralModelNodeAtom
getChain() const	SBMStructuralModelNodeAtom
getChainID() const	SBMStructuralModelNodeAtom
getChainIDString() const	SBMStructuralModelNodeAtom
getChainName() const	SBMStructuralModelNodeAtom
getComment() const	SBMStructuralModelNodeAtom
getCommentSize() const	SBMStructuralModelNodeAtom
getConnectedComponent(SBNodeIndexer &nodeIndexer)	SBMStructuralModelNodeAtom
getCovalentRadius() const	SBMStructuralModelNodeAtom
getCurrentValence() const	SBMStructuralModelNodeAtom
getCustomType() const	SBMStructuralModelNodeAtom
getDocument() const	SBDDataGraphNode
getElectronegativity() const	SBMStructuralModelNodeAtom
getElementName() const	SBMStructuralModelNodeAtom	virtual
getElementSymbol() const	SBMStructuralModelNodeAtom	virtual
getElementType() const	SBMStructuralModelNodeAtom	virtual
getExpectedValence() const	SBMStructuralModelNodeAtom
getFlags() const	SBDDataGraphNode
getFormalCharge() const	SBMStructuralModelNodeAtom
getGeometry() const	SBMStructuralModelNodeAtom
getGeometryString() const	SBMStructuralModelNodeAtom
getGeometryString(Geometry geometry)	SBMStructuralModelNodeAtom	static
getGroup() const	SBMStructuralModelNodeAtom
getHighlightingFlag() const	SBDDataGraphNode
getHybridization() const	SBMStructuralModelNodeAtom
getHybridizationString() const	SBMStructuralModelNodeAtom
getHybridizationString(Hybridization hybridization)	SBMStructuralModelNodeAtom	static
getHydrogens(SBNodeIndexer &nodeIndexer)	SBMStructuralModelNodeAtom
getInheritedFlags() const	SBDDataGraphNode
getInsertionCode() const	SBMStructuralModelNodeAtom
getMaterial() const	SBDDataGraphNode
getMaterialOwner() const	SBDDataGraphNode
getMetalSubcategory() const	SBMStructuralModelNodeAtom
getMetalSubcategoryString() const	SBMStructuralModelNodeAtom
getMobilityFlag() const	SBMStructuralModelNode
getMolecule() const	SBMStructuralModelNodeAtom
getMoleculeName() const	SBMStructuralModelNodeAtom
getName() const	SBMStructuralModelNodeAtom
getNewBondDirections(SBVector< SBVector3 > &bondDirectionVector, unsigned int numberOfBonds, bool includeExistingHydrogens=false)	SBMStructuralModelNodeAtom
getNextNode() const	SBDDataGraphNode
getNextNode(SBDDataGraphNode::Type nodeType) const	SBDDataGraphNode
getNode(unsigned int nodeIndex)	SBDDataGraphNode	static
getNodeIndex() const	SBDDataGraphNode
getNodes(SBNodeIndexer &nodeIndexer, const SBNodePredicate &selectionPredicate=SBDDataGraphNode::All(), const SBNodePredicate &visitPredicate=SBDDataGraphNode::All(), bool includeDependencies=false)	SBMStructuralModelNode	virtual
getNumberOfBondedAtoms(const SBElement::Type element) const	SBMStructuralModelNodeAtom
getNumberOfBonds() const	SBMStructuralModelNodeAtom
getNumberOfHydrogens() const	SBMStructuralModelNodeAtom
getOccupancy() const	SBMStructuralModelNodeAtom
getOxidationState() const	SBMStructuralModelNodeAtom
getParent() const	SBDDataGraphNode
getPartialCharge() const	SBMStructuralModelNodeAtom
getPeriod() const	SBMStructuralModelNodeAtom
getPosition() const	SBMStructuralModelNodeParticle
getPreviousNode() const	SBDDataGraphNode
getPreviousNode(SBDDataGraphNode::Type nodeType) const	SBDDataGraphNode
getRecordType() const	SBMStructuralModelNodeAtom
getRecordTypeSize() const	SBMStructuralModelNodeAtom
getResidue() const	SBMStructuralModelNodeAtom
getResidueName() const	SBMStructuralModelNodeAtom
getResidueSequenceNumber() const	SBMStructuralModelNodeAtom
getResidueSequenceNumberString() const	SBMStructuralModelNodeAtom
getResidueTypeString() const	SBMStructuralModelNodeAtom
getResonance() const	SBMStructuralModelNodeAtom
getRoot() const	SBDDataGraphNode
getSegment() const	SBMStructuralModelNodeAtom
getSegmentName() const	SBMStructuralModelNodeAtom
getSelected() const	SBDDataGraphNode
getSelectionFlag() const	SBDDataGraphNode
getSerialNumber() const	SBMStructuralModelNodeAtom
getStatusBit() const	SBMStructuralModelNodeAtom
getStatusBitSize() const	SBMStructuralModelNodeAtom
getSubstructure() const	SBMStructuralModelNodeAtom
getSubstructureName() const	SBMStructuralModelNodeAtom
getSubstructureSequenceNumber() const	SBMStructuralModelNodeAtom
getSubstructureSequenceNumberString() const	SBMStructuralModelNodeAtom
getSYBYLType() const	SBMStructuralModelNodeAtom
getSYBYLTypeSize() const	SBMStructuralModelNodeAtom
getTemperatureFactor() const	SBMStructuralModelNodeAtom
getThisNode() const	SBDDataGraphNode
getType() const	SBMStructuralModelNodeAtom	virtual
getTypeString(Type type)	SBDDataGraphNode	static
getVanDerWaalsRadius() const	SBMStructuralModelNodeAtom
getVisibilityFlag() const	SBDDataGraphNode
getVisible() const	SBDDataGraphNode
getWaterFlag() const	SBMStructuralModelNodeAtom
getX() const	SBMStructuralModelNodeParticle
getY() const	SBMStructuralModelNodeParticle
getZ() const	SBMStructuralModelNodeParticle
hasAltLocation() const	SBMStructuralModelNodeAtom
hasAnisotropicTFactors() const	SBMStructuralModelNodeAtom
hasAromaticity() const	SBMStructuralModelNodeAtom
hasChainID() const	SBMStructuralModelNodeAtom
hasComment() const	SBMStructuralModelNodeAtom
hasCustomType() const	SBMStructuralModelNodeAtom
hasFormalCharge() const	SBMStructuralModelNodeAtom
hasGeometry() const	SBMStructuralModelNodeAtom
hasHybridization() const	SBMStructuralModelNodeAtom
hasInsertionCode() const	SBMStructuralModelNodeAtom
hasName() const	SBMStructuralModelNodeAtom
hasOccupancy() const	SBMStructuralModelNodeAtom
hasOneOf(const SBNodeIndexer &nodeIndexer) const	SBDDataGraphNode
hasOxidationState() const	SBMStructuralModelNodeAtom
hasPartialCharge() const	SBMStructuralModelNodeAtom
hasRecordType() const	SBMStructuralModelNodeAtom
hasResidueSequenceNumber() const	SBMStructuralModelNodeAtom
hasResonance() const	SBMStructuralModelNodeAtom
hasSerialNumber() const	SBMStructuralModelNodeAtom
hasStatusBit() const	SBMStructuralModelNodeAtom
hasSubstructureSequenceNumber() const	SBMStructuralModelNodeAtom
hasSYBYLType() const	SBMStructuralModelNodeAtom
hasTemperatureFactor() const	SBMStructuralModelNodeAtom
hasWaterFlag() const	SBMStructuralModelNodeAtom
Hybridization enum name	SBMStructuralModelNodeAtom
InteractionModel enum value	SBDDataGraphNode
InteractionModelArticulatedBodySystem enum value	SBDDataGraphNode
InteractionModelParticleSystem enum value	SBDDataGraphNode
InteractionModelRigidBodySystem enum value	SBDDataGraphNode
isAttachedToHydrogenBondDonor() const	SBMStructuralModelNodeAtom
isCarboxylOxygen() const	SBMStructuralModelNodeAtom
isCreated() const	SBDDataGraphNode
isDynamicalModel() const	SBDDataGraphNode
isErased() const	SBDDataGraphNode
isFromAminoAcidBackbone() const	SBMStructuralModelNodeAtom
isFromNucleicAcidBackbone() const	SBMStructuralModelNodeAtom
isHighlighted() const	SBDDataGraphNode
isHydrogenBondAcceptor() const	SBMStructuralModelNodeAtom
isHydrogenBondDonor() const	SBMStructuralModelNodeAtom
isIn(SBDDataGraphNode *node) const	SBDDataGraphNode
isIn(const SBNodeIndexer &nodeIndexer) const	SBDDataGraphNode
isIn(SBPointerIndexer< SBDDataGraphNode > *nodePointerIndexer) const	SBDDataGraphNode
isInChain() const	SBMStructuralModelNodeAtom
isInMolecule() const	SBMStructuralModelNodeAtom
isInResidue() const	SBMStructuralModelNodeAtom
isInSegment() const	SBMStructuralModelNodeAtom
isInSubstructure() const	SBMStructuralModelNodeAtom
isInteractionModel() const	SBDDataGraphNode
isMetal() const	SBMStructuralModelNodeAtom
isModel() const	SBDDataGraphNode
isNitroOxygen() const	SBMStructuralModelNodeAtom
isOneOf(const SBNodeIndexer &nodeIndexer) const	SBDDataGraphNode
isOneOf(SBPointerIndexer< SBDDataGraphNode > *nodePointerIndexer) const	SBDDataGraphNode
isPropertyModel() const	SBDDataGraphNode
isSelected() const	SBDDataGraphNode
isSerializable() const	SBMStructuralModelNodeAtom	virtual
isSimulator() const	SBDDataGraphNode
isStructuralModel() const	SBDDataGraphNode
isStructuralNode() const	SBDDataGraphNode
isStructuralParticle() const	SBDDataGraphNode
isSulfoneOxygen() const	SBMStructuralModelNodeAtom
isThiocarboxylOxygen() const	SBMStructuralModelNodeAtom
isType(Type type) const	SBDDataGraphNode
isVisible() const	SBDDataGraphNode
isVisualModel() const	SBDDataGraphNode
Label enum value	SBDDataGraphNode
Molecule enum value	SBDDataGraphNode
NodeGroup enum value	SBDDataGraphNode
ParticleSystem enum value	SBDDataGraphNode
Path enum value	SBDDataGraphNode
perceiveHybridization()	SBMStructuralModelNodeAtom
print(unsigned int offset=0) const	SBMStructuralModelNodeAtom	virtual
PropertyModel enum value	SBDDataGraphNode
PropertyModelFunction enum value	SBDDataGraphNode
Protein enum value	SBDDataGraphNode
PseudoAtom enum value	SBDDataGraphNode
removeChild(SBDDataGraphNode *node)	SBDDataGraphNode	virtual
removeHydrogens()	SBMStructuralModelNodeAtom
removeMaterial()	SBDDataGraphNode
RenderingPass enum name	SBDDataGraphNode
Residue enum value	SBDDataGraphNode
RigidBody enum value	SBDDataGraphNode
RigidBodySystem enum value	SBDDataGraphNode
Root enum value	SBDDataGraphNode
SBDDataGraphNode()	SBDDataGraphNode	protected
SBDDataGraphNode(SBDDataGraphNodeData *dataPointer)	SBDDataGraphNode	protected
SBMModelNode()	SBMModelNode	protected
SBMModelNode(SBMModelNodeData *dataPointer)	SBMModelNode	protected
SBMStructuralModelNode()	SBMStructuralModelNode	protected
SBMStructuralModelNode(SBMStructuralModelNodeData *dataPointer)	SBMStructuralModelNode	protected
SBMStructuralModelNodeAtom(SBElement::Type element)	SBMStructuralModelNodeAtom
SBMStructuralModelNodeAtom(SBElement::Type element, const SBQuantity::length &x, const SBQuantity::length &y, const SBQuantity::length &z)	SBMStructuralModelNodeAtom
SBMStructuralModelNodeAtom(SBElement::Type element, SBPosition3 const &p)	SBMStructuralModelNodeAtom
SBMStructuralModelNodeAtom(SBElement::Type element, std::string &n, SBPosition3 const &p)	SBMStructuralModelNodeAtom
SBMStructuralModelNodeParticle(SBMStructuralModelNodeParticleData *dataPointer)	SBMStructuralModelNodeParticle	protected
Segment enum value	SBDDataGraphNode
serialize(SBCSerializer *serializer, const SBNodeIndexer &nodeIndexer, const SBVersionNumber &sdkVersionNumber=SB_SDK_VERSION_NUMBER, const SBVersionNumber &classVersionNumber=SBVersionNumber(1, 0, 0)) const	SBMStructuralModelNodeAtom	virtual
setAltLocation(const char &altLocation)	SBMStructuralModelNodeAtom
setAnisotropicTFactors(const std::vector< int > &ATF)	SBMStructuralModelNodeAtom
setAromaticity(const bool &aromaticity)	SBMStructuralModelNodeAtom
setComment(char *const &comment, int const &size)	SBMStructuralModelNodeAtom
setCustomType(const int &water)	SBMStructuralModelNodeAtom
setElementType(SBElement::Type e)	SBMStructuralModelNodeAtom	virtual
setFormalCharge(const int &formalCharge)	SBMStructuralModelNodeAtom
setGeometry(const Geometry &geometry)	SBMStructuralModelNodeAtom
setHighlightingFlag(bool flag)	SBDDataGraphNode
setHybridization(const Hybridization &hybridization)	SBMStructuralModelNodeAtom
setInsertionCode(const char &insertionCode)	SBMStructuralModelNodeAtom
setMobilityFlag(bool flag)	SBMStructuralModelNode
setName(const std::string &name)	SBMStructuralModelNodeAtom
setOccupancy(const SBQuantity::dimensionless &occupancy)	SBMStructuralModelNodeAtom
setOxidationState(const int &oxidationState)	SBMStructuralModelNodeAtom
setPartialCharge(const float &partialCharge)	SBMStructuralModelNodeAtom
setPosition(SBPosition3 const &newPosition)	SBMStructuralModelNodeParticle
setPosition(SBPosition3 const &newPosition, SBPosition3 const &oldPosition)	SBMStructuralModelNodeParticle
setRecordType(char *const &recordType, int const &size)	SBMStructuralModelNodeAtom
setResonance(const bool &resonance)	SBMStructuralModelNodeAtom
setSelectionFlag(bool flag)	SBDDataGraphNode
setSerialNumber(const int &serialNumber)	SBMStructuralModelNodeAtom
setStatusBit(char *const &statusBit, int const &size)	SBMStructuralModelNodeAtom
setSYBYLType(char *const &SYBYLType, int const &size)	SBMStructuralModelNodeAtom
setTemperatureFactor(const double &temperatureFactor)	SBMStructuralModelNodeAtom
setVisibilityFlag(bool flag)	SBDDataGraphNode
setWaterFlag(const bool &water)	SBMStructuralModelNodeAtom
setX(const SBQuantity::length &x)	SBMStructuralModelNodeParticle
setY(const SBQuantity::length &y)	SBMStructuralModelNodeParticle
setZ(const SBQuantity::length &z)	SBMStructuralModelNodeParticle
SideChain enum value	SBDDataGraphNode
Simulator enum value	SBDDataGraphNode
SimulatorArticulatedBodySystem enum value	SBDDataGraphNode
SimulatorParticleSystem enum value	SBDDataGraphNode
SimulatorRigidBodySystem enum value	SBDDataGraphNode
StateUpdater enum value	SBDDataGraphNode
StateUpdaterArticulatedBodySystem enum value	SBDDataGraphNode
StateUpdaterParticleSystem enum value	SBDDataGraphNode
StateUpdaterRigidBodySystem enum value	SBDDataGraphNode
StructuralGroup enum value	SBDDataGraphNode
StructuralModel enum value	SBDDataGraphNode
StructuralModelConformation enum value	SBDDataGraphNode
StructuralModelNode enum value	SBDDataGraphNode
StructuralModelNodeAtom enum value	SBDDataGraphNode
StructuralModelNodeBackbone enum value	SBDDataGraphNode
StructuralModelNodeBond enum value	SBDDataGraphNode
StructuralModelNodeChain enum value	SBDDataGraphNode
StructuralModelNodeGroup enum value	SBDDataGraphNode
StructuralModelNodeMolecule enum value	SBDDataGraphNode
StructuralModelNodeParticle enum value	SBDDataGraphNode
StructuralModelNodeProtein enum value	SBDDataGraphNode
StructuralModelNodePseudoAtom enum value	SBDDataGraphNode
StructuralModelNodeResidue enum value	SBDDataGraphNode
StructuralModelNodeRoot enum value	SBDDataGraphNode
StructuralModelNodeSegment enum value	SBDDataGraphNode
StructuralModelNodeSideChain enum value	SBDDataGraphNode
StructuralModelPath enum value	SBDDataGraphNode
StructuralParticle enum value	SBDDataGraphNode
Type enum name	SBDDataGraphNode
Undefined enum value	SBDDataGraphNode
unserialize(SBCSerializer *serializer, const SBNodeIndexer &nodeIndexer, const SBVersionNumber &sdkVersionNumber=SB_SDK_VERSION_NUMBER, const SBVersionNumber &classVersionNumber=SBVersionNumber(1, 0, 0))	SBMStructuralModelNodeAtom	virtual
VisualModel enum value	SBDDataGraphNode
~SBDDataGraphNode()	SBDDataGraphNode	protectedvirtual
~SBMStructuralModelNodeAtom()	SBMStructuralModelNodeAtom	virtual