| A enum value | SBMStructuralModelNodeResidue | |
| AcidicPolar enum value | SBMStructuralModelNodeResidue | |
| addChild(SBNode *node, SBNode *nextNode=0) | SBMStructuralModelNodeResidue | virtual |
| SBMStructuralModelNode::addChild(SBDDataGraphNode *node, SBDDataGraphNode *nextNode=0) | SBDDataGraphNode | virtual |
| addHydrogensByResidueType() | SBMStructuralModelNodeResidue | |
| addMaterial(SBDDataGraphNodeMaterial *material) | SBDDataGraphNode | |
| ALA enum value | SBMStructuralModelNodeResidue | |
| Alpha enum value | SBMStructuralModelNodeResidue | |
| Animation enum value | SBDDataGraphNode | |
| ARG enum value | SBMStructuralModelNodeResidue | |
| ArticulatedBody enum value | SBDDataGraphNode | |
| ArticulatedBodySystem enum value | SBDDataGraphNode | |
| ASN enum value | SBMStructuralModelNodeResidue | |
| ASP enum value | SBMStructuralModelNodeResidue | |
| Asset enum value | SBDDataGraphNode | |
| ASX enum value | SBMStructuralModelNodeResidue | |
| Atom enum value | SBDDataGraphNode | |
| Backbone enum value | SBDDataGraphNode | |
| baseSignalIsConnectedToSlot(SBCReferenceTarget *referenceTarget, void(SBCReferenceTarget::*functionPointer)(SBBaseEvent *)) const | SBDDataGraphNode | |
| BasicPolar enum value | SBMStructuralModelNodeResidue | |
| Beta enum value | SBMStructuralModelNodeResidue | |
| Bond enum value | SBDDataGraphNode | |
| C enum value | SBMStructuralModelNodeResidue | |
| Camera enum value | SBDDataGraphNode | |
| canAddChild(SBNode *node, SBNode *nextNode=0) const | SBMStructuralModelNodeResidue | virtual |
| SBMStructuralModelNode::canAddChild(SBDDataGraphNode *node, SBDDataGraphNode *nextNode=0) const | SBDDataGraphNode | virtual |
| canAddChildType(SBNode::Type nodeType) const | SBMStructuralModelNodeResidue | virtual |
| canHaveDescendantType(SBNode::Type nodeType) const | SBMStructuralModelNodeResidue | virtual |
| Chain enum value | SBDDataGraphNode | |
| clearComment() | SBMStructuralModelNodeGroup | |
| clearStatusBit() | SBMStructuralModelNodeGroup | |
| clearStructuralID() | SBMStructuralModelNodeGroup | |
| clone() | SBMStructuralModelNodeResidue | virtual |
| SBDDataGraphNode::clone(const SBNodeIndexer &sourceNodeIndexer, SBNodeIndexer &destinationNodeIndexer) | SBDDataGraphNode | static |
| computeAminoAcidChi1Angle() | SBMStructuralModelNodeResidue | |
| computeAminoAcidChi2Angle() | SBMStructuralModelNodeResidue | |
| computeAminoAcidChi3Angle() | SBMStructuralModelNodeResidue | |
| computeAminoAcidChi4Angle() | SBMStructuralModelNodeResidue | |
| computeAminoAcidChi5Angle() | SBMStructuralModelNodeResidue | |
| computeAminoAcidPhiAngle() | SBMStructuralModelNodeResidue | |
| computeAminoAcidPsiAngle() | SBMStructuralModelNodeResidue | |
| computeNucleicAcidAlphaAngle() | SBMStructuralModelNodeResidue | |
| computeNucleicAcidBetaAngle() | SBMStructuralModelNodeResidue | |
| computeNucleicAcidChiAngle() | SBMStructuralModelNodeResidue | |
| computeNucleicAcidDeltaAngle() | SBMStructuralModelNodeResidue | |
| computeNucleicAcidEpsilonAngle() | SBMStructuralModelNodeResidue | |
| computeNucleicAcidGammaAngle() | SBMStructuralModelNodeResidue | |
| computeNucleicAcidZetaAngle() | SBMStructuralModelNodeResidue | |
| Conformation enum value | SBDDataGraphNode | |
| connectBaseSignalToSlot(SBCReferenceTarget *referenceTarget, void(SBCReferenceTarget::*functionPointer)(SBBaseEvent *), SBCReferenceTarget *nextReferenceTarget=0, void(SBCReferenceTarget::*nextFunctionPointer)(SBBaseEvent *)=0) | SBDDataGraphNode | |
| connectStructuralSignalToSlot(SBCReferenceTarget *referenceTarget, void(SBCReferenceTarget::*functionPointer)(SBStructuralEvent *), SBCReferenceTarget *nextReferenceTarget=0, void(SBCReferenceTarget::*nextFunctionPointer)(SBStructuralEvent *)=0) (defined in SBMStructuralModelNode) | SBMStructuralModelNode | |
| Controller enum value | SBDDataGraphNode | |
| ControllerNode enum value | SBDDataGraphNode | |
| countNodes(SBDDataGraphNode::Type nodeType, bool selectedNodesOnly=false, const SBNodePredicate &visitPredicate=SBDDataGraphNode::All(), bool includeDependencies=false) const | SBDDataGraphNode | |
| countNodes(const SBNodePredicate &selectionPredicate=SBDDataGraphNode::All(), const SBNodePredicate &visitPredicate=SBDDataGraphNode::All(), bool includeDependencies=false) const | SBDDataGraphNode | |
| create() | SBDDataGraphNode | |
| createCovalentBondsByResidueType() | SBMStructuralModelNodeResidue | |
| CYS enum value | SBMStructuralModelNodeResidue | |
| DA enum value | SBMStructuralModelNodeResidue | |
| DataGraphNodeGroup enum value | SBDDataGraphNode | |
| dataPointer (defined in SBCReferenceTarget) | SBCReferenceTarget | protected |
| DC enum value | SBMStructuralModelNodeResidue | |
| descendsFrom(SBDDataGraphNode *node) const | SBDDataGraphNode | |
| descendsFrom(const SBNodeIndexer &nodeIndexer) const | SBDDataGraphNode | |
| descendsFrom(SBPointerIndexer< SBDDataGraphNode > *nodePointerIndexer) const | SBDDataGraphNode | |
| DG enum value | SBMStructuralModelNodeResidue | |
| DI enum value | SBMStructuralModelNodeResidue | |
| disconnectBaseSignalFromSlot(SBCReferenceTarget *referenceTarget, void(SBCReferenceTarget::*functionPointer)(SBBaseEvent *)) | SBDDataGraphNode | |
| disconnectStructuralSignalFromSlot(SBCReferenceTarget *referenceTarget, void(SBCReferenceTarget::*functionPointer)(SBStructuralEvent *)) (defined in SBMStructuralModelNode) | SBMStructuralModelNode | |
| display(RenderingPass renderingPass) | SBDDataGraphNode | virtual |
| display() | SBDDataGraphNode | virtual |
| displayForSelection() | SBDDataGraphNode | virtual |
| displayForShadow() | SBDDataGraphNode | virtual |
| Document enum value | SBDDataGraphNode | |
| DocumentManager enum value | SBDDataGraphNode | |
| DT enum value | SBMStructuralModelNodeResidue | |
| DynamicalGroup enum value | SBDDataGraphNode | |
| DynamicalModel enum value | SBDDataGraphNode | |
| DynamicalModelArticulatedBodySystem enum value | SBDDataGraphNode | |
| DynamicalModelNode enum value | SBDDataGraphNode | |
| DynamicalModelNodeArticulatedBody enum value | SBDDataGraphNode | |
| DynamicalModelNodeGroup enum value | SBDDataGraphNode | |
| DynamicalModelNodeParticle enum value | SBDDataGraphNode | |
| DynamicalModelNodeRigidBody enum value | SBDDataGraphNode | |
| DynamicalModelNodeRoot enum value | SBDDataGraphNode | |
| DynamicalModelParticleSystem enum value | SBDDataGraphNode | |
| DynamicalModelRigidBodySystem enum value | SBDDataGraphNode | |
| DynamicalNode enum value | SBDDataGraphNode | |
| DynamicalParticle enum value | SBDDataGraphNode | |
| DynamicalRoot enum value | SBDDataGraphNode | |
| erase() | SBDDataGraphNode | |
| Folder enum value | SBDDataGraphNode | |
| forEachNodeDepthFirst(void(*action)(SBDDataGraphNode *node)) | SBMStructuralModelNodeGroup | virtual |
| forEachNodeDepthFirst(SBCClass *object, void(SBCClass::*action)(SBDDataGraphNode *node)) | SBMStructuralModelNodeGroup | virtual |
| forEachNodeInSelection(SBNodeIndexer &nodeIndexer, void(*action)(SBDDataGraphNode *node)) | SBDDataGraphNode | static |
| forEachNodeInSelection(SBNodeIndexer &nodeIndexer, SBCClass *object, void(SBCClass::*action)(SBDDataGraphNode *node)) | SBDDataGraphNode | static |
| forEachStructuralNodeBreadthFirst(void(*action)(SBMStructuralModelNode *node)) (defined in SBMStructuralModelNode) | SBMStructuralModelNode | |
| forEachStructuralNodeBreadthFirst(SBCClass *object, void(SBCClass::*action)(SBMStructuralModelNode *node)) (defined in SBMStructuralModelNode) | SBMStructuralModelNode | |
| forEachStructuralNodeDepthFirst(void(*action)(SBMStructuralModelNode *node)) (defined in SBMStructuralModelNode) | SBMStructuralModelNode | |
| forEachStructuralNodeDepthFirst(SBCClass *object, void(SBCClass::*action)(SBMStructuralModelNode *node)) (defined in SBMStructuralModelNode) | SBMStructuralModelNode | |
| forEachStructuralNodeInSelection(std::vector< SBMStructuralModelNode *> &selection, void(*action)(SBMStructuralModelNode *node)) (defined in SBMStructuralModelNode) | SBMStructuralModelNode | static |
| forEachStructuralNodeInSelection(std::vector< SBMStructuralModelNode *> &selection, SBCClass *object, void(SBCClass::*action)(SBMStructuralModelNode *node)) (defined in SBMStructuralModelNode) | SBMStructuralModelNode | static |
| G enum value | SBMStructuralModelNodeResidue | |
| getAllStructuralNodesBreadthFirstBottomUp(std::vector< SBMStructuralModelNode *> &nodeIndexer) (defined in SBMStructuralModelNode) | SBMStructuralModelNode | |
| getAllStructuralNodesBreadthFirstTopDown(std::vector< SBMStructuralModelNode *> &nodeIndexer) (defined in SBMStructuralModelNode) | SBMStructuralModelNode | |
| getAllStructuralNodesDepthFirst(std::vector< SBMStructuralModelNode *> &nodeIndexer) (defined in SBMStructuralModelNode) | SBMStructuralModelNode | |
| getAminoAcidOneLetterCode() const | SBMStructuralModelNodeResidue | |
| getAminoAcidOneLetterCode(const ResidueType residueType) | SBMStructuralModelNodeResidue | static |
| getBackbone() const | SBMStructuralModelNodeResidue | |
| getChildren() const (defined in SBMStructuralModelNodeGroup) | SBMStructuralModelNodeGroup | virtual |
| getComment() const | SBMStructuralModelNodeGroup | |
| getDefaultOpacity() const | SBDDataGraphNode | virtual |
| getDefaultTransparency() const | SBDDataGraphNode | virtual |
| getDissociationConstant1() const | SBMStructuralModelNodeResidue | |
| getDissociationConstant1(const ResidueType residueType) | SBMStructuralModelNodeResidue | static |
| getDissociationConstant2() const | SBMStructuralModelNodeResidue | |
| getDissociationConstant2(const ResidueType residueType) | SBMStructuralModelNodeResidue | static |
| getDocument() const | SBDDataGraphNode | |
| getFlags() const | SBDDataGraphNode | |
| getHierarchyString(const std::string &separator="/", bool includeNodeType=false) const | SBDDataGraphNode | virtual |
| getHighlightingFlag() const | SBDDataGraphNode | |
| getHydrophobicity() const | SBMStructuralModelNodeResidue | |
| getHydrophobicity(const HydrophobicityScale hydrophobicityScale) const | SBMStructuralModelNodeResidue | |
| getHydrophobicity(const ResidueType residueType, const HydrophobicityScale hydrophobicityScale) | SBMStructuralModelNodeResidue | static |
| getHydrophobicityScale() const | SBMStructuralModelNodeResidue | |
| getHydrophobicityScaleCount() const | SBMStructuralModelNodeResidue | |
| getHydrophobicityScaleCurrentIndex() const | SBMStructuralModelNodeResidue | |
| getHydrophobicityScaleItemText(const int index) const | SBMStructuralModelNodeResidue | |
| getHydrophobicityScaleString() const | SBMStructuralModelNodeResidue | |
| getHydrophobicityScaleString(const HydrophobicityScale hydrophobicityScale) | SBMStructuralModelNodeResidue | static |
| getInheritedFlags() const | SBDDataGraphNode | |
| getInheritedOpacity() const | SBDDataGraphNode | |
| getInheritedTransparency() const | SBDDataGraphNode | |
| getInternalStructuralNodesBreadthFirstBottomUp(std::vector< SBMStructuralModelNode *> &nodeIndexer) (defined in SBMStructuralModelNode) | SBMStructuralModelNode | |
| getInternalStructuralNodesBreadthFirstTopDown(std::vector< SBMStructuralModelNode *> &nodeIndexer) (defined in SBMStructuralModelNode) | SBMStructuralModelNode | |
| getInternalStructuralNodesDepthFirst(std::vector< SBMStructuralModelNode *> &nodeIndexer) (defined in SBMStructuralModelNode) | SBMStructuralModelNode | |
| getIsoelectricPointPH() const | SBMStructuralModelNodeResidue | |
| getIsoelectricPointPH(const ResidueType residueType) | SBMStructuralModelNodeResidue | static |
| getLeafStructuralNodesBreadthFirstBottomUp(std::vector< SBMStructuralModelNode *> &nodeIndexer) (defined in SBMStructuralModelNode) | SBMStructuralModelNode | |
| getLeafStructuralNodesBreadthFirstTopDown(std::vector< SBMStructuralModelNode *> &nodeIndexer) (defined in SBMStructuralModelNode) | SBMStructuralModelNode | |
| getLeafStructuralNodesDepthFirst(std::vector< SBMStructuralModelNode *> &nodeIndexer) (defined in SBMStructuralModelNode) | SBMStructuralModelNode | |
| getLockedFlag() const | SBMStructuralModelNode | virtual |
| getMaterial() const | SBDDataGraphNode | |
| getMaterialOwner() const | SBDDataGraphNode | |
| getMaximumOpacity() const | SBDDataGraphNode | virtual |
| getMaximumTransparency() const | SBMStructuralModelNode | virtual |
| getMemoryFootprint() const (defined in SBCReferenceTarget) | SBCReferenceTarget | |
| getMinimumOpacity() const | SBMStructuralModelNode | virtual |
| getMinimumTransparency() const | SBDDataGraphNode | virtual |
| getMobilityFlag() const | SBMStructuralModelNode | |
| getModel() const (defined in SBMStructuralModelNode) | SBMStructuralModelNode | |
| getMolecularWeight() const | SBMStructuralModelNodeGroup | |
| getName() const | SBDDataGraphNode | virtual |
| getNextAminoAcid() const | SBMStructuralModelNodeResidue | |
| getNextNode() const | SBDDataGraphNode | |
| getNextNode(SBDDataGraphNode::Type nodeType) const | SBDDataGraphNode | |
| getNextNucleicAcid() const | SBMStructuralModelNodeResidue | |
| getNextResidue() const | SBMStructuralModelNodeResidue | |
| getNextStructuralNode() const (defined in SBMStructuralModelNode) | SBMStructuralModelNode | |
| getNode(unsigned int nodeIndex) | SBDDataGraphNode | static |
| getNodeIndex() const | SBDDataGraphNode | |
| getNodes(SBNodeIndexer &nodeIndexer, SBNode::Type nodeType, bool selectedNodesOnly=false, const SBNodePredicate &visitPredicate=SBDDataGraphNode::All(), bool includeDependencies=false) const | SBMStructuralModelNodeGroup | virtual |
| getNodes(SBNodeIndexer &nodeIndexer, const SBNodePredicate &selectionPredicate=SBDDataGraphNode::All(), const SBNodePredicate &visitPredicate=SBDDataGraphNode::All(), bool includeDependencies=false) const | SBMStructuralModelNodeGroup | virtual |
| getOpacity() const | SBMStructuralModelNode | virtual |
| getOpacitySingleStep() const | SBDDataGraphNode | virtual |
| getOpacitySuffix() const | SBDDataGraphNode | virtual |
| getParent() const | SBDDataGraphNode | |
| getPreviousAminoAcid() const | SBMStructuralModelNodeResidue | |
| getPreviousNode() const | SBDDataGraphNode | |
| getPreviousNode(SBDDataGraphNode::Type nodeType) const | SBDDataGraphNode | |
| getPreviousNucleicAcid() const | SBMStructuralModelNodeResidue | |
| getPreviousResidue() const | SBMStructuralModelNodeResidue | |
| getPreviousStructuralNode() const (defined in SBMStructuralModelNode) | SBMStructuralModelNode | |
| getResidueType() const | SBMStructuralModelNodeResidue | |
| getResidueTypeFromString(const std::string &s) | SBMStructuralModelNodeResidue | static |
| getResidueTypeFullName() const | SBMStructuralModelNodeResidue | |
| getResidueTypeFullName(ResidueType residueType) | SBMStructuralModelNodeResidue | static |
| getResidueTypeString() const | SBMStructuralModelNodeResidue | |
| getResidueTypeString(ResidueType residueType) | SBMStructuralModelNodeResidue | static |
| getRoot() const | SBDDataGraphNode | |
| getSecondaryStructureType() const | SBMStructuralModelNodeResidue | |
| getSecondaryStructureTypeString() const | SBMStructuralModelNodeResidue | |
| getSecondaryStructureTypeString(SecondaryStructureType secondaryStructureType) | SBMStructuralModelNodeResidue | static |
| getSelected() const | SBDDataGraphNode | |
| getSelectionFlag() const | SBDDataGraphNode | |
| getSideChain() const | SBMStructuralModelNodeResidue | |
| getSideChainCharge() const | SBMStructuralModelNodeResidue | |
| getSideChainCharge(const ResidueType residueType) | SBMStructuralModelNodeResidue | static |
| getSideChainChargeString() const | SBMStructuralModelNodeResidue | |
| getSideChainChargeString(const SideChainCharge sideChainCharge) | SBMStructuralModelNodeResidue | static |
| getSideChainPolarity() const | SBMStructuralModelNodeResidue | |
| getSideChainPolarity(const ResidueType residueType) | SBMStructuralModelNodeResidue | static |
| getSideChainPolarityString() const | SBMStructuralModelNodeResidue | |
| getSideChainPolarityString(const SideChainPolarity sideChainPolarity) | SBMStructuralModelNodeResidue | static |
| getStatusBit() const | SBMStructuralModelNodeGroup | |
| getStructuralID() const | SBMStructuralModelNodeGroup | |
| getStructuralNodesBreadthFirst(std::vector< SBMStructuralModelNode *> &nodeVectorTopDown, std::vector< SBMStructuralModelNode *> &nodeVectorBottomUp, bool(*selectionRule)(SBMStructuralModelNode *)) (defined in SBMStructuralModelNode) | SBMStructuralModelNode | |
| getStructuralNodesBreadthFirstBottomUp(std::vector< SBMStructuralModelNode *> &nodeIndexer, bool(*selectionRule)(SBMStructuralModelNode *)) (defined in SBMStructuralModelNode) | SBMStructuralModelNode | |
| getStructuralNodesBreadthFirstTopDown(std::vector< SBMStructuralModelNode *> &nodeIndexer, bool(*selectionRule)(SBMStructuralModelNode *)) (defined in SBMStructuralModelNode) | SBMStructuralModelNode | |
| getStructuralNodesDepthFirst(std::vector< SBMStructuralModelNode *> &nodeIndexer, bool(*selectionRule)(SBMStructuralModelNode *)) (defined in SBMStructuralModelNode) | SBMStructuralModelNode | |
| getThisNode() const | SBDDataGraphNode | |
| getTransparency() const | SBMStructuralModelNode | virtual |
| getTransparencySingleStep() const | SBDDataGraphNode | virtual |
| getTransparencySuffix() const | SBDDataGraphNode | virtual |
| getType() const | SBMStructuralModelNodeResidue | virtual |
| getTypeString(bool humanReadable=false) const | SBDDataGraphNode | |
| getTypeString(Type type, bool humanReadable=false) | SBDDataGraphNode | static |
| getVisibilityFlag() const | SBDDataGraphNode | |
| getVisible() const | SBDDataGraphNode | |
| GLN enum value | SBMStructuralModelNodeResidue | |
| GLU enum value | SBMStructuralModelNodeResidue | |
| GLX enum value | SBMStructuralModelNodeResidue | |
| GLY enum value | SBMStructuralModelNodeResidue | |
| hasAminoAcidChi1Angle() const | SBMStructuralModelNodeResidue | |
| hasAminoAcidChi1Angle(const ResidueType residueType) | SBMStructuralModelNodeResidue | static |
| hasAminoAcidChi2Angle() const | SBMStructuralModelNodeResidue | |
| hasAminoAcidChi2Angle(const ResidueType residueType) | SBMStructuralModelNodeResidue | static |
| hasAminoAcidChi3Angle() const | SBMStructuralModelNodeResidue | |
| hasAminoAcidChi3Angle(const ResidueType residueType) | SBMStructuralModelNodeResidue | static |
| hasAminoAcidChi4Angle() const | SBMStructuralModelNodeResidue | |
| hasAminoAcidChi4Angle(const ResidueType residueType) | SBMStructuralModelNodeResidue | static |
| hasAminoAcidChi5Angle() const | SBMStructuralModelNodeResidue | |
| hasAminoAcidChi5Angle(const ResidueType residueType) | SBMStructuralModelNodeResidue | static |
| hasComment() const | SBMStructuralModelNodeGroup | |
| hasCompleteAminoAcidBackbone() const | SBMStructuralModelNodeResidue | |
| hasDissociationConstant() const | SBMStructuralModelNodeResidue | |
| hasDissociationConstant(const ResidueType residueType) | SBMStructuralModelNodeResidue | static |
| hasHydrophobicity() const | SBMStructuralModelNodeResidue | |
| hasHydrophobicity(const ResidueType residueType) | SBMStructuralModelNodeResidue | static |
| hasOneOf(const SBNodeIndexer &nodeIndexer) const | SBDDataGraphNode | |
| hasOpacityRange() const | SBDDataGraphNode | virtual |
| hasSideChainCharge() const | SBMStructuralModelNodeResidue | |
| hasSideChainCharge(const ResidueType residueType) | SBMStructuralModelNodeResidue | static |
| hasSideChainPolarity() const | SBMStructuralModelNodeResidue | |
| hasSideChainPolarity(const ResidueType residueType) | SBMStructuralModelNodeResidue | static |
| hasStatusBit() const | SBMStructuralModelNodeGroup | |
| hasStructuralID() const | SBMStructuralModelNodeGroup | |
| hasTransparencyRange() const | SBDDataGraphNode | virtual |
| HIS enum value | SBMStructuralModelNodeResidue | |
| HydrogenBond enum value | SBDDataGraphNode | |
| HydrogenBondGroup enum value | SBDDataGraphNode | |
| HydrophobicityScale enum name | SBMStructuralModelNodeResidue | |
| I enum value | SBMStructuralModelNodeResidue | |
| ILE enum value | SBMStructuralModelNodeResidue | |
| InteractionModel enum value | SBDDataGraphNode | |
| InteractionModelArticulatedBodySystem enum value | SBDDataGraphNode | |
| InteractionModelParticleSystem enum value | SBDDataGraphNode | |
| InteractionModelRigidBodySystem enum value | SBDDataGraphNode | |
| isAminoAcid() const | SBMStructuralModelNodeResidue | |
| isAminoAcid(ResidueType residueType) | SBMStructuralModelNodeResidue | static |
| isCreated() const | SBDDataGraphNode | |
| isDynamicalModel() const | SBDDataGraphNode | |
| isErased() const | SBDDataGraphNode | |
| isHighlighted() const | SBDDataGraphNode | |
| isIn(SBDDataGraphNode *node) const | SBDDataGraphNode | |
| isIn(const SBNodeIndexer &nodeIndexer) const | SBDDataGraphNode | |
| isIn(SBPointerIndexer< SBDDataGraphNode > *nodePointerIndexer) const | SBDDataGraphNode | |
| isInteractionModel() const | SBDDataGraphNode | |
| isLocked() const | SBMStructuralModelNode | virtual |
| isMesh() const | SBDDataGraphNode | |
| isModel() const | SBDDataGraphNode | |
| isNucleicAcid() const | SBMStructuralModelNodeResidue | |
| isNucleicAcid(ResidueType residueType) | SBMStructuralModelNodeResidue | static |
| isOneOf(const SBNodeIndexer &nodeIndexer) const | SBDDataGraphNode | |
| isOneOf(SBPointerIndexer< SBDDataGraphNode > *nodePointerIndexer) const | SBDDataGraphNode | |
| isPropertyModel() const | SBDDataGraphNode | |
| isSelected() const | SBDDataGraphNode | |
| isSerializable() const | SBMStructuralModelNodeResidue | virtual |
| isSimulator() const | SBDDataGraphNode | |
| isStructuralModel() const | SBDDataGraphNode | |
| isStructuralNode() const | SBDDataGraphNode | |
| isStructuralParticle() const | SBDDataGraphNode | |
| isTerminal() const | SBMStructuralModelNodeResidue | |
| isType(Type type) const | SBDDataGraphNode | |
| isVisible() const | SBDDataGraphNode | |
| isVisualModel() const | SBDDataGraphNode | |
| isWater() const | SBMStructuralModelNodeGroup | |
| Label enum value | SBDDataGraphNode | |
| LEU enum value | SBMStructuralModelNodeResidue | |
| LYS enum value | SBMStructuralModelNodeResidue | |
| Mesh enum value | SBDDataGraphNode | |
| MET enum value | SBMStructuralModelNodeResidue | |
| Molecule enum value | SBDDataGraphNode | |
| Negative enum value | SBMStructuralModelNodeResidue | |
| Neutral enum value | SBMStructuralModelNodeResidue | |
| NodeGroup enum value | SBDDataGraphNode | |
| Nonpolar enum value | SBMStructuralModelNodeResidue | |
| Note enum value | SBDDataGraphNode | |
| onBaseEvent(SBEvent *event) (defined in SBMStructuralModelNodeGroup) | SBMStructuralModelNodeGroup | virtual |
| orientAminoAcidSideChain(const SBQuantity::degree &chi1, const SBQuantity::degree &chi2=SBQuantity::degree(0.0), const SBQuantity::degree &chi3=SBQuantity::degree(0.0), const SBQuantity::degree &chi4=SBQuantity::degree(0.0), const SBQuantity::degree &chi5=SBQuantity::degree(0.0)) | SBMStructuralModelNodeResidue | |
| ParticleSystem enum value | SBDDataGraphNode | |
| Path enum value | SBDDataGraphNode | |
| PHE enum value | SBMStructuralModelNodeResidue | |
| Polar enum value | SBMStructuralModelNodeResidue | |
| Positive enum value | SBMStructuralModelNodeResidue | |
| Presentation enum value | SBDDataGraphNode | |
| print(unsigned int offset=0) const | SBMStructuralModelNodeGroup | virtual |
| printReferencesToOwners() const (defined in SBCReferenceTarget) | SBCReferenceTarget | |
| PRO enum value | SBMStructuralModelNodeResidue | |
| PropertyModel enum value | SBDDataGraphNode | |
| PropertyModelFunction enum value | SBDDataGraphNode | |
| Protein enum value | SBDDataGraphNode | |
| PseudoAtom enum value | SBDDataGraphNode | |
| PseudoBond enum value | SBDDataGraphNode | |
| PYL enum value | SBMStructuralModelNodeResidue | |
| removeAllReferenceOwners() (defined in SBCReferenceTarget) | SBCReferenceTarget | protected |
| removeChild(SBNode *node) | SBMStructuralModelNodeResidue | virtual |
| SBMStructuralModelNode::removeChild(SBDDataGraphNode *node) | SBDDataGraphNode | virtual |
| removeMaterial() | SBDDataGraphNode | |
| RenderingPass enum name | SBDDataGraphNode | |
| Residue enum value | SBDDataGraphNode | |
| ResidueType enum name | SBMStructuralModelNodeResidue | |
| RigidBody enum value | SBDDataGraphNode | |
| RigidBodySystem enum value | SBDDataGraphNode | |
| Root enum value | SBDDataGraphNode | |
| SB_DECLARE_DATA(SBMStructuralModelNodeResidue) (defined in SBMStructuralModelNodeResidue) | SBMStructuralModelNodeResidue | |
| SB_DECLARE_DATA(SBMStructuralModelNodeGroup) (defined in SBMStructuralModelNodeGroup) | SBMStructuralModelNodeGroup | |
| SB_DECLARE_DATA(SBMStructuralModelNode) (defined in SBMStructuralModelNode) | SBMStructuralModelNode | |
| SB_DECLARE_DATA(SBMModelNode) (defined in SBMModelNode) | SBMModelNode | |
| SB_DECLARE_DATA(SBDDataGraphNode) (defined in SBDDataGraphNode) | SBDDataGraphNode | |
| SB_NODE_GETTER_0(, SBMStructuralModelNodeResidue::ResidueType, GetResidueType) (defined in SBMStructuralModelNodeResidue) | SBMStructuralModelNodeResidue | |
| SB_NODE_GETTER_0(, std::string, GetResidueTypeString) (defined in SBMStructuralModelNodeResidue) | SBMStructuralModelNodeResidue | |
| SB_NODE_GETTER_0(, SBMStructuralModelNodeResidue::SecondaryStructureType, GetSecondaryStructureType) (defined in SBMStructuralModelNodeResidue) | SBMStructuralModelNodeResidue | |
| SB_NODE_GETTER_0(, double, GetHydrophobicity) (defined in SBMStructuralModelNodeResidue) | SBMStructuralModelNodeResidue | |
| SB_NODE_GETTER_0(, SBMStructuralModelNodeResidue::HydrophobicityScale, GetHydrophobicityScale) (defined in SBMStructuralModelNodeResidue) | SBMStructuralModelNodeResidue | |
| SB_NODE_GETTER_0(, SBMStructuralModelNodeResidue::SideChainCharge, GetSideChainCharge) (defined in SBMStructuralModelNodeResidue) | SBMStructuralModelNodeResidue | |
| SB_NODE_GETTER_0(, std::string, GetSideChainChargeString) (defined in SBMStructuralModelNodeResidue) | SBMStructuralModelNodeResidue | |
| SB_NODE_GETTER_0(, SBMStructuralModelNodeResidue::SideChainPolarity, GetSideChainPolarity) (defined in SBMStructuralModelNodeResidue) | SBMStructuralModelNodeResidue | |
| SB_NODE_GETTER_0(, std::string, GetSideChainPolarityString) (defined in SBMStructuralModelNodeResidue) | SBMStructuralModelNodeResidue | |
| SB_NODE_GETTER_0(, double, GetDissociationConstant1) (defined in SBMStructuralModelNodeResidue) | SBMStructuralModelNodeResidue | |
| SB_NODE_GETTER_0(, double, GetDissociationConstant2) (defined in SBMStructuralModelNodeResidue) | SBMStructuralModelNodeResidue | |
| SB_NODE_GETTER_0(, double, GetIsoelectricPointPH) (defined in SBMStructuralModelNodeResidue) | SBMStructuralModelNodeResidue | |
| SB_NODE_GETTER_0(, int, GetResidueSequenceNumber) (defined in SBMStructuralModelNodeResidue) | SBMStructuralModelNodeResidue | |
| SB_NODE_GETTER_0(, std::string, GetComment) (defined in SBMStructuralModelNodeGroup) | SBMStructuralModelNodeGroup | |
| SB_NODE_GETTER_0(, std::string, GetStatusBit) (defined in SBMStructuralModelNodeGroup) | SBMStructuralModelNodeGroup | |
| SB_NODE_GETTER_0(, int, GetStructuralID) (defined in SBMStructuralModelNodeGroup) | SBMStructuralModelNodeGroup | |
| SB_NODE_GETTER_0(, bool, GetMobilityFlag) (defined in SBMStructuralModelNode) | SBMStructuralModelNode | |
| SB_NODE_PREDICATE_0(, IsAminoAcid) (defined in SBMStructuralModelNodeResidue) | SBMStructuralModelNodeResidue | |
| SB_NODE_PREDICATE_0(, IsNucleicAcid) (defined in SBMStructuralModelNodeResidue) | SBMStructuralModelNodeResidue | |
| SB_NODE_PREDICATE_0(, IsTerminal) (defined in SBMStructuralModelNodeResidue) | SBMStructuralModelNodeResidue | |
| SB_NODE_PREDICATE_0(, HasCompleteAminoAcidBackbone) (defined in SBMStructuralModelNodeResidue) | SBMStructuralModelNodeResidue | |
| SB_NODE_PREDICATE_0(, HasHydrophobicity) (defined in SBMStructuralModelNodeResidue) | SBMStructuralModelNodeResidue | |
| SB_NODE_PREDICATE_0(, HasSideChainCharge) (defined in SBMStructuralModelNodeResidue) | SBMStructuralModelNodeResidue | |
| SB_NODE_PREDICATE_0(, HasSideChainPolarity) (defined in SBMStructuralModelNodeResidue) | SBMStructuralModelNodeResidue | |
| SB_NODE_PREDICATE_0(, HasDissociationConstant) (defined in SBMStructuralModelNodeResidue) | SBMStructuralModelNodeResidue | |
| SB_NODE_PREDICATE_0(, HasResidueSequenceNumber) (defined in SBMStructuralModelNodeResidue) | SBMStructuralModelNodeResidue | |
| SB_NODE_PREDICATE_0(, HasComment) (defined in SBMStructuralModelNodeGroup) | SBMStructuralModelNodeGroup | |
| SB_NODE_PREDICATE_0(, HasStatusBit) (defined in SBMStructuralModelNodeGroup) | SBMStructuralModelNodeGroup | |
| SB_NODE_PREDICATE_0(, HasStructuralID) (defined in SBMStructuralModelNodeGroup) | SBMStructuralModelNodeGroup | |
| SBCReferenceTarget() (defined in SBCReferenceTarget) | SBCReferenceTarget | |
| SBCReferenceTarget(SBCReferenceTargetData *dataPointer) (defined in SBCReferenceTarget) | SBCReferenceTarget | protected |
| SBDDataGraphNode() | SBDDataGraphNode | protected |
| SBDDataGraphNode(SBDDataGraphNodeData *dataPointer) | SBDDataGraphNode | protected |
| SBMModelNode() | SBMModelNode | protected |
| SBMModelNode(SBMModelNodeData *dataPointer) | SBMModelNode | protected |
| SBMStructuralModelNode() | SBMStructuralModelNode | protected |
| SBMStructuralModelNode(SBMStructuralModelNodeData *dataPointer) | SBMStructuralModelNode | protected |
| SBMStructuralModelNodeGroup() | SBMStructuralModelNodeGroup | |
| SBMStructuralModelNodeGroup(const std::string &n) (defined in SBMStructuralModelNodeGroup) | SBMStructuralModelNodeGroup | |
| SBMStructuralModelNodeGroup(SBMStructuralModelNodeGroupData *dataPointer) | SBMStructuralModelNodeGroup | protected |
| SBMStructuralModelNodeResidue() (defined in SBMStructuralModelNodeResidue) | SBMStructuralModelNodeResidue | |
| SBMStructuralModelNodeResidue(const std::string &n) (defined in SBMStructuralModelNodeResidue) | SBMStructuralModelNodeResidue | |
| SEC enum value | SBMStructuralModelNodeResidue | |
| SecondaryStructureType enum name | SBMStructuralModelNodeResidue | |
| Segment enum value | SBDDataGraphNode | |
| SER enum value | SBMStructuralModelNodeResidue | |
| serialize(SBCSerializer *serializer, const SBNodeIndexer &nodeIndexer, const SBVersionNumber &sdkVersionNumber=SB_SDK_VERSION_NUMBER, const SBVersionNumber &classVersionNumber=SBVersionNumber(1, 0, 0)) const | SBMStructuralModelNodeResidue | virtual |
| setComment(const std::string &comment) | SBMStructuralModelNodeGroup | |
| setHighlightingFlag(bool flag) | SBDDataGraphNode | |
| setHydrophobicityScale(const HydrophobicityScale hydrophobicityScale) | SBMStructuralModelNodeResidue | |
| setHydrophobicityScaleCurrentIndex(const int index) | SBMStructuralModelNodeResidue | |
| setLockedFlag(bool flag) | SBDDataGraphNode | virtual |
| setMobilityFlag(bool flag) | SBMStructuralModelNode | |
| setName(const std::string &name) | SBMStructuralModelNodeResidue | virtual |
| setOpacity(unsigned int opacity) | SBDDataGraphNode | virtual |
| setResidueType(ResidueType residueType) | SBMStructuralModelNodeResidue | |
| setResidueType(const std::string &s) | SBMStructuralModelNodeResidue | |
| setSecondaryStructureType(SecondaryStructureType type) | SBMStructuralModelNodeResidue | |
| setSelectionFlag(bool flag) | SBDDataGraphNode | |
| setStatusBit(const std::string &statusBit) | SBMStructuralModelNodeGroup | |
| setStructuralID(const int &groupID) | SBMStructuralModelNodeGroup | |
| setTransparency(unsigned int transparency) | SBDDataGraphNode | virtual |
| setVisibilityFlag(bool flag) | SBDDataGraphNode | |
| SideChain enum value | SBDDataGraphNode | |
| SideChainCharge enum name | SBMStructuralModelNodeResidue | |
| SideChainPolarity enum name | SBMStructuralModelNodeResidue | |
| Simulator enum value | SBDDataGraphNode | |
| SimulatorArticulatedBodySystem enum value | SBDDataGraphNode | |
| SimulatorParticleSystem enum value | SBDDataGraphNode | |
| SimulatorRigidBodySystem enum value | SBDDataGraphNode | |
| StateUpdater enum value | SBDDataGraphNode | |
| StateUpdaterArticulatedBodySystem enum value | SBDDataGraphNode | |
| StateUpdaterParticleSystem enum value | SBDDataGraphNode | |
| StateUpdaterRigidBodySystem enum value | SBDDataGraphNode | |
| StructuralGroup enum value | SBDDataGraphNode | |
| StructuralModel enum value | SBDDataGraphNode | |
| StructuralModelConformation enum value | SBDDataGraphNode | |
| StructuralModelNode enum value | SBDDataGraphNode | |
| StructuralModelNodeAtom enum value | SBDDataGraphNode | |
| StructuralModelNodeBackbone enum value | SBDDataGraphNode | |
| StructuralModelNodeBond enum value | SBDDataGraphNode | |
| StructuralModelNodeChain enum value | SBDDataGraphNode | |
| StructuralModelNodeGroup enum value | SBDDataGraphNode | |
| StructuralModelNodeHydrogenBond enum value | SBDDataGraphNode | |
| StructuralModelNodeHydrogenBondGroup enum value | SBDDataGraphNode | |
| StructuralModelNodeMolecule enum value | SBDDataGraphNode | |
| StructuralModelNodeParticle enum value | SBDDataGraphNode | |
| StructuralModelNodeProtein enum value | SBDDataGraphNode | |
| StructuralModelNodePseudoAtom enum value | SBDDataGraphNode | |
| StructuralModelNodePseudoBond enum value | SBDDataGraphNode | |
| StructuralModelNodeResidue enum value | SBDDataGraphNode | |
| StructuralModelNodeRoot enum value | SBDDataGraphNode | |
| StructuralModelNodeSegment enum value | SBDDataGraphNode | |
| StructuralModelNodeSideChain enum value | SBDDataGraphNode | |
| StructuralModelPath enum value | SBDDataGraphNode | |
| StructuralParticle enum value | SBDDataGraphNode | |
| structuralSignalIsConnectedToSlot(SBCReferenceTarget *referenceTarget, void(SBCReferenceTarget::*functionPointer)(SBStructuralEvent *)) const (defined in SBMStructuralModelNode) | SBMStructuralModelNode | |
| THR enum value | SBMStructuralModelNodeResidue | |
| TRP enum value | SBMStructuralModelNodeResidue | |
| Type enum name | SBDDataGraphNode | |
| TYR enum value | SBMStructuralModelNodeResidue | |
| U enum value | SBMStructuralModelNodeResidue | |
| Undefined enum value | SBMStructuralModelNodeResidue | |
| UndefinedSideChainCharge enum value | SBMStructuralModelNodeResidue | |
| UndefinedSideChainPolarity enum value | SBMStructuralModelNodeResidue | |
| unserialize(SBCSerializer *serializer, const SBNodeIndexer &nodeIndexer, const SBVersionNumber &sdkVersionNumber=SB_SDK_VERSION_NUMBER, const SBVersionNumber &classVersionNumber=SBVersionNumber(1, 0, 0)) | SBMStructuralModelNodeResidue | virtual |
| Unstructured enum value | SBMStructuralModelNodeResidue | |
| VAL enum value | SBMStructuralModelNodeResidue | |
| VisualModel enum value | SBDDataGraphNode | |
| VisualModelMesh enum value | SBDDataGraphNode | |
| XAA enum value | SBMStructuralModelNodeResidue | |
| XLE enum value | SBMStructuralModelNodeResidue | |
| ~SBCReferenceTarget() (defined in SBCReferenceTarget) | SBCReferenceTarget | virtual |
| ~SBDDataGraphNode() | SBDDataGraphNode | protectedvirtual |
| ~SBMModelNode() (defined in SBMModelNode) | SBMModelNode | protectedvirtual |
| ~SBMStructuralModelNode() (defined in SBMStructuralModelNode) | SBMStructuralModelNode | virtual |
| ~SBMStructuralModelNodeGroup() (defined in SBMStructuralModelNodeGroup) | SBMStructuralModelNodeGroup | virtual |
| ~SBMStructuralModelNodeResidue() (defined in SBMStructuralModelNodeResidue) | SBMStructuralModelNodeResidue | virtual |
