Folder attributes#
Folder attributes are defined in the folder attribute space (short name: sm), that matches only folder nodes.
Attributes inherited from the node attribute space:
| Attribute name | Short name | Possible values | Examples |
|---|---|---|---|
| hasMaterial | hm |
true, false |
fo.hmnot fo.hm |
| hidden | h |
true, false |
fo.hnot fo.h |
| name | n |
strings in quotes | fo.n "A"fo.n "L*" |
| ownsMaterial | om |
true, false |
fo.om |
| selected | true, false |
fo.selectednot fo.selected |
|
| selectionFlag | sf |
true, false |
fo.sf falsefo.sf |
| visibilityFlag | vf |
true, false |
fo.vf falsefo.vf |
| visible | v |
true, false |
fo.vnot fo.v |
Attributes specific to the folder attribute space:
| Attribute name | Short name | Possible values | Examples |
|---|---|---|---|
| formalCharge | fc |
integers | fo.fc > 1fo.fc 6:8 |
| numberOfAtoms | nat |
integers | fo.nat < 1000fo.nat 100:200 |
| numberOfCarbons | nC |
integers | fo.nC < 10fo.nC 10:20 |
| numberOfChains | nc |
integers | fo.nc < 3fo.nc 2:4 |
| numberOfCoarseGrainedAtoms | ncga |
integers | fo.ncga < 1000fo.ncga 100:200 |
| numberOfHydrogens | nH |
integers | fo.nH < 10fo.nH 10:20 |
| numberOfMolecules | nm |
integers | fo.nm < 3fo.nm 2:4 |
| numberOfNitrogens | nN |
integers | fo.nN < 10fo.nN 10:20 |
| numberOfOxygens | nO |
integers | fo.nO < 10fo.nO 10:20 |
| numberOfResidues | nr |
integers | fo.nr > 130fo.nr 100:130 |
| numberOfSegments | ns |
integers | fo.ns < 3fo.ns 1:3 |
| numberOfStructuralGroups | nsg |
integers | fo.nsg > 10fo.nsg 10:13 |
| numberOfStructuralModels | nsm |
integers | fo.nsm > 4fo.nsm 2:4 |
| numberOfSulfurs | nS |
integers | fo.nS < 10fo.nS 10:20 |
| partialCharge | pc |
real | fo.pc > 1.5fo.pc 1.5:2.0 |
formalCharge#
The folder.formalCharge attribute (short name: fo.fc) matches folders with structures having specific total formal charge.
Possible values: integers.
Examples:
folder.fc 1(short version:fo.fc 1): matches folders with structures having formal charge equal to 1folder.fc 6:8(short version:fo.fc 6:8): matches folders with structures having formal charge between 6 and 8
hasMaterial#
Inherited from node.hasMaterial.
hidden#
Inherited from node.hidden.
name#
Inherited from node.name.
numberOfAtoms#
The folder.numberOfAtoms attribute (short name: fo.nat) matches folders with specific number of atoms.
Possible values: integers.
Examples:
folder.nat > 100(short version:fo.nat > 100): matches folders with the number of atoms more than 100folder.nat 100:200(short version:fo.nat 100:200): matches folders with the number of atoms between 100 and 200
numberOfCarbons#
The folder.numberOfCarbons attribute (short name: fo.nC) matches folders with specific number of Carbon atoms. It works in the similar way as the numberOfAtoms attribute.
numberOfChains#
The folder.numberOfChains attribute (short name: fo.nc) matches folders with specific number of chains.
Possible values: integers.
Examples:
folder.numberOfChains < 3(short version:fo.nc < 3): matches folders with the number of chains less than 3folder.numberOfChains 2:4(short version:fo.nc 2:4): matches folders with the number of chains between 2 and 4
numberOfCoarseGrainedAtoms#
The folder.numberOfCoarseGrainedAtoms attribute (short name: fo.ncga) matches folders with specific number of coarse-grained atoms. It works in the similar way as the numberOfAtoms attribute.
numberOfHydrogens#
The folder.numberOfHydrogens attribute (short name: fo.nH) matches folders with specific number of Hydrogen atoms. It works in the similar way as the numberOfAtoms attribute.
numberOfMolecules#
The folder.numberOfMolecules attribute (short name: fo.nm) matches folders with specific number of molecules.
Possible values: integers.
Examples:
folder.numberOfMolecules < 3(short version:fo.nm < 3): matches folders with the number of molecules less than 3folder.numberOfMolecules 2:4(short version:fo.nm 2:4): matches folders with the number of molecules between 2 and 4
numberOfNitrogens#
The folder.numberOfNitrogens attribute (short name: fo.nN) matches folders with specific number of Nitrogen atoms. It works in the similar way as the numberOfAtoms attribute.
numberOfOxygens#
The folder.numberOfOxygens attribute (short name: fo.nO) matches folders with specific number of Oxygen atoms. It works in the similar way as the numberOfAtoms attribute.
numberOfResidues#
The folder.numberOfResidues attribute (short name: fo.nr) matches folders with specific number of residues.
Possible values: integers.
Examples:
folder.numberOfResidues > 100(short version:fo.nr > 100): matches folders with the number of residues greater than 100folder.numberOfResidues 100:120(short version:fo.nr 100:120): matches folders with the number of residues between 100 and 120
numberOfSegments#
The folder.numberOfSegments attribute (short name: fo.ns) matches folders with specific number of segments.
Possible values: integers.
Examples:
folder.numberOfSegments > 2(short version:fo.ns > 2): matches folders with the number of segments greater than 2folder.numberOfSegments 2:4(short version:fo.ns 2:4): matches folders with the number of segments between 2 and 4
numberOfStructuralGroups#
The folder.numberOfStructuralGroups attribute (short name: fo.nsg) matches folders with specific number of structural groups.
Possible values: integers.
Examples:
folder.numberOfStructuralGroups > 10(short version:fo.nsg > 10): matches folders with the number of structural groups greater than 10folder.numberOfStructuralGroups 10:12(short version:fo.nsg 10:12): matches folders with the number of structural groups between 10 and 12
numberOfStructuralModels#
The folder.numberOfStructuralModels attribute (short name: fo.nsm) matches folders with specific number of structural models.
Possible values: integers.
Examples:
folder.numberOfStructuralModels > 4(short version:fo.nsm > 4): matches folders with the number of structural models greater than 4folder.numberOfStructuralModels 2:4(short version:fo.nsm 2:4): matches folders with the number of structural models between 2 and 4
numberOfSulfurs#
The folder.numberOfSulfurs attribute (short name: fo.nS) matches folders with specific number of Sulfur atoms. It works in the similar way as the numberOfAtoms attribute.
ownsMaterial#
Inherited from node.ownsMaterial.
partialCharge#
The folder.partialCharge attribute (short name: fo.pc) matches folders with structures having specific total partial charge.
Possible values: real.
Examples:
folder.pc 1(short version:fo.pc 1): matches folders with structures having partial charge equal to 1folder.pc 1.5:2.0(short version:fo.pc 1.5:2.0): matches folders with structures having partial charge between 1.5 and 2.0
selected#
Inherited from node.selected, but without the short name s.
selectionFlag#
Inherited from node.selectionFlag.
visibilityFlag#
Inherited from node.visibilityFlag.
visible#
Inherited from node.visible.