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Side chain attributes#

Side chain attributes are defined in the sideChain attribute space (short name: s), that matches only side chain nodesc.

Attributes inherited from the node attribute space:

Attribute name Short name Possible values Examples
hasMaterial hm true, false sc.hm
not sc.hm
hidden h true, false sc.h
not sc.h
name n strings in quotes sc.n "A"
sc.n "L*"
ownsMaterial om true, false sc.om
selected true, false sc.selected
not sc.selected
selectionFlag sf true, false sc.sf false
sc.sf
visibilityFlag vf true, false sc.vf false
sc.vf
visible v true, false sc.v
not sc.v

Attributes inherited from the structuralGroup attribute space:

Attribute name Short name Possible values Examples
formalCharge fc integers sc.fc > 1
sc.fc 6:8
numberOfAtoms nat integers sc.nat < 1000
sc.nat 100:200
numberOfCarbons nC integers sc.nC < 10
sc.nC 10:20
numberOfHydrogens nH integers sc.nH < 10
sc.nH 10:20
numberOfNitrogens nN integers sc.nN < 10
sc.nN 10:20
numberOfOxygens nO integers sc.nO < 10
sc.nO 10:20
numberOfSulfurs nS integers sc.nS < 10
sc.nS 10:20
numberOfCoarseGrainedAtoms ncga integers sc.ncga < 1000
sc.ncga 100:200
partialCharge pc real sc.pc > 1.5
sc.pc 1.5:2.0

formalCharge#

Inherited from structuralGroup.formalCharge.

hasMaterial#

Inherited from node.hasMaterial.

hidden#

Inherited from node.hidden.

name#

Inherited from node.name.

numberOfAtoms#

Inherited from structuralGroup.numberOfAtoms.

numberOfCarbons#

Inherited from structuralGroup.numberOfCarbons.

numberOfCoarseGrainedAtoms#

Inherited from structuralGroup.numberOfCoarseGrainedAtoms.

numberOfHydrogens#

Inherited from structuralGroup.numberOfHydrogens.

numberOfNitrogens#

Inherited from structuralGroup.numberOfNitrogens.

numberOfOxygens#

Inherited from structuralGroup.numberOfOxygens.

numberOfSulfurs#

Inherited from structuralGroup.numberOfSulfurs.

ownsMaterial#

Inherited from node.ownsMaterial.

partialCharge#

Inherited from structuralGroup.partialCharge.

selected#

Inherited from node.selected, but without the short name s.

selectionFlag#

Inherited from node.selectionFlag.

visibilityFlag#

Inherited from node.visibilityFlag.

visible#

Inherited from node.visible.