Examples# Below you can find various examples on using SAMSON Pyton API. If you would like your examples to be featured here, please contact us. Animations# Presentation: play path Create animations and movies without presentations Building systems# Building a decane molecule Create atoms on a sphere Creation of a carbon nanotube fabric: replication, modification of positions Colorizization and visualization# Colorize atoms by position Visualize coarse-grained systems Colorize connected components by molecular weight Exporting# Export trajectory frames Processing# Compute RMSD between two molecules Compute bond lengths along paths Compute interatomic distances along path Selections# Select atoms and bonds by location Select connected components by molecular weight Simulation# Examples of usage of ASE package Apps and GUIs# Embedded app: a simple GUI with buttons Select connected components by molecular weight
